Conserved Protein Domain Family
Gate

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pfam07670: Gate (489105 is an unknown moldel)
Nucleoside recognition
This region in the nucleoside transporter proteins are responsible for determining nucleoside specificity in the human CNT1 and CNT2 proteins. In the FeoB proteins, which are believed to be Fe2+ transporters, it includes the membrane pore region, so the function of this region is likely to be more general than just nucleoside specificity. This family may represent the pore and gate, with a wide potential range of specificity. Hence its name 'Gate'.
Statistics
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PSSM-Id: 489105
Aligned: 232 rows
Threshold Bit Score: 29.9313
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8DI51       504 LSRAGKMIVLLVLILGLLNSvgtdgsfgkqdstQSILSAFSRQITPIFSPm-G-IQPDNWPATVGLFTGVFAKEVMVGTM 581 Synechococcus e...
Q8EQ85        41 SIGLISILVFWLGMMRIAKE-------------AGLLDLLAKVFRPIVVRi-FpDIPKDHPAIGYILSNMTANMFGLGNA 106 Oceanobacillus ...
P35157        41 SFGLMSVLVFWLGLMKIAEQ-------------SGLLDIFSRMCRPFISKl-FpDIPPDHPAMGYILSNLMANFFGLGNA 106 Bacillus subtil...
Q81FU8        44 CIGLISVLVFWLGLMKIAEE-------------AGLLKKLVTLFMPIVKRl-FpEIPKDHPSMGFILSNMMANFFGLGNA 109 Bacillus cereus...
Q9KCJ7        41 CIGLISILVFWLGLMRVAQQ-------------AGLLKGLSRLMRPVAKRl-FpEVPPDHPAMGYILSNMSANMFGLGNA 106 Bacillus halodu...
Q7VU08        48 MVLLFGTLTLWLGFLRIAEA-------------AGLVERLASLLGPLFARl-MpEVPRGHPAIGLITLNFAANGLGLDNA 113 Bordetella pert...
6_pfamImport   1 ALGLTGMMALWLGIMRVGER-------------AGVVDLFARLVNPLMRHl-FpSVPPGHAANGAMMMNVSANVLGLDNA 66 
Q97LT5        41 MISLLGIMCLWCGVMRIAEK-------------SGLTDKLSIVLRPILKIvfK-DISKNNNVMGPMIMNITSNMLGLGNA 106 Clostridium ace...
Q8XHF2        41 IISLVGIMCFWCGVMKIAEN-------------SGLTSKVAKLLNPILKKifK-ESSHSDEAMGAIVMNLTANMFGLSNA 106 Clostridium per...
Q899E4        47 IIKLLGIMSLWCGIMKIAEK-------------SGLTDKLAKILKPILRLi-LkDAGKDDKTLGSIVMNITANMMGLSNA 112 Clostridium tetani
Q8DI51       582 dalyTELarqenqeasageevepfsvweqlrqavlsipqnlselgqqmldplgfqvlqeaenpeaaaevqevhyttfgqm 661 Synechococcus e...
Q8EQ85       107 ----ATPigika-----------------------------------------------------------------mee 117 Oceanobacillus ...
P35157       107 ----ATPlgika-----------------------------------------------------------------meq 117 Bacillus subtil...
Q81FU8       110 ----ATPlgika-----------------------------------------------------------------meq 120 Bacillus cereus...
Q9KCJ7       107 ----ATPmgika-----------------------------------------------------------------meq 117 Bacillus halodu...
Q7VU08       114 ----ATPiglra-----------------------------------------------------------------mre 124 Bordetella pert...
6_pfamImport  67 ----ATPlglqa-----------------------------------------------------------------mre 77 
Q97LT5       107 ----ATPfgiktme-------------------------------------------------------------emqki 121 Clostridium ace...
Q8XHF2       107 ----ATPlgikams--------------------------------------------------------------elnk 120 Clostridium per...
Q899E4       113 ----ATPfgika-----------------------------------------------------------------men 123 Clostridium tetani
Q8DI51       662 akRFRTPTAAI--AFLIFVLLYFPCVSATAA--VYRETNLS 698 Synechococcus elongatus
Q8EQ85       118 mkKLNKDSDTAsrSMITFLTLNTTGLTIVPTt-VIGIRMQY 157 Oceanobacillus iheyensis
P35157       118 mkKLNGNRSEAsrSMITFLAVNTSCITLIPTtvIAVRMAYS 158 Bacillus subtilis subsp. subtilis str. 168
Q81FU8       121 lkELNGGKDSAsrSMVTFLALNTSAITLIPTt-VISIRMTY 160 Bacillus cereus ATCC 14579
Q9KCJ7       118 lkELNGGKDSAsrSMITLLAINTASITLIPTt-VISIRMNY 157 Bacillus halodurans
Q7VU08       125 lqSLNPNPDTAsnAQILFLVLNASSLTLLPVtlFMFRAQQG 165 Bordetella pertussis
6_pfamImport  78 lqSINPQPRRAsdAQLMFVVLNTAGVTLVPTsvIAIRQALA 118
Q97LT5       122 nkKKSTATN----DMAKFLVINAACIQLLPTt-IISIRAAC 157 Clostridium acetobutylicum
Q8XHF2       121 inKEKDGRASN--DMALFLVINAACIQLIPSt-VISIRAAA 158 Clostridium perfringens
Q899E4       124 mqEINLDKDKAsdDMAMFLVLNAACIQIIPTt-IISIRAAS 163 Clostridium tetani
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