2YHG


Conserved Protein Domain Family
Sde182_NH-like

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pfam07632: Sde182_NH-like (This model is not part of the current CDD release)
Cellulose-binding Sde182, nucleoside hydrolase-like domain
This Rossmann-related domain is found at the N-terminal end of the C-terminal domain region of the cellulose-binding protein Sde182 from Saccharophagus, which seems to have capacity to bind plant carbohydrates. This domain shows an alpha/beta configuration with a central beta-sheet of eight beta-strands and 12 alpha-helices. It is structurally similar to pyrimidine-specific ribonucleoside hydrolases (NH). This domain is also found in other uncharacterised bacterial and fungal proteins.
Statistics
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PSSM-Id: 517797
Aligned: 91 rows
Threshold Bit Score: 191.219
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2YHG_A                  30 RVIHTTDMg---aDPDDEQSLVRQLVMANEYDLEGIITT---TGCWKKSTSN-TAYVDRILNAYSQAYPNLSKHA----- 97  Sacch...
Q7UTP2                  43 RLAVLTDIg---gDPDDQQSMIRLLVYSNEFEIEALIASasgTRGELKESVTrPDLIHELIDAYETVLPNLKQHA----- 114 Pirel...
WP_022053096            37 RIVVLTDIapadvEPDDMESMVRLLAHADMFEIEGLVATggwNICGGTYPESwMDSLLTVIDAYEKDLPNLMKRSeqegf 116 Phoca...
CDD20463                38 RIVVLTDIaptdlEPDDMESMVRLLVHADLYEIEGLIATggwNSCGRSYPDEwMENMQKVINAYEEDLPNLMKRSgqkgf 117
Q3IXI2                   5 RVFISTDLrlaaeEKDDSQSLIHALLYQDKMNIVGIAAT---PSKWNaqdg-lvgdIDRIIDVYGLDHAKLAARS----- 75  Rhodo...
WP_008199949            34 RVIISSDIgg--tDPDDFQSMIHLLMYSDRIELEGLVSS---P-FGDGRKED----FIDMIDIYEKDYNQLLSHA----- 98  Algor...
WP_014020918            32 RVLISSDIgg--tDPDDFQSMIHLLMYADQFEIEGLVAS---P-FGDGRKSN----FLDIIDDYEKDYAQLAKHA----- 96  Cyclo...
WP_015808616            30 RILISTDIgg--tDPDDNQSLTHFLMYSNIFNTEGLISS---PSYGNGSKQE----ILRMIDLYEKDLPKLKKHI----- 95  Pedob...
PRJNA61269:NIASO_18685  28 RLLISTDIgg--tDPDDNQSMAHFLMYSNRFTTEGLVSS---PSYGKGSKQE----LLRMIDLYEKDLPALQKNE----- 93 
3_pfamImport             1 RVIVSNDIgg--sDPDDFQSMVHYLLYSDLFDTEGLISS---P-WGAGRVKD----ILEVIDQYEIDYPKLRSYS----- 65 
2YHG_A                  98 ------------EGFPTPAYLDSINVMGQRGYgmgdVGSGKD-SAGSNLIIAAVD-KDDP-RPVWATCWGGCNTIAQAVW 162 Sacch...
Q7UTP2                 115 ------------EGWPQPEALRSVVVSGNPHRerphIGQGHD-TDGSRLLIQRIDaGTPK-SPLCITLWGGQTDLAQALY 180 Pirel...
WP_022053096           117 lperqengkqelGYWPTAGYLRSRTVLGSRGLgierIGENND-SPGSDLIIKLVD-EEDS-RPLWITVWGGANTLAQAVW 193 Phoca...
CDD20463               118 lpvekeagkqtlGYWPSAAYLRSRTAFGSRDLgvskLGEENR-SQGSQMIIDLVD-EKDD-RPLWVMVWGGANTLAQAIW 194
Q3IXI2                  76 ------------GDFKTAEQLKAISWQGALDTa--pSQGWSNpTDSSRAIIAEAKkAEAAgEVLNVLTWGGETDLAQALH 141 Rhodo...
WP_008199949            99 ------------PELPTPNSLRAITKQGQKDAa--pFKGYTTpTEGSEWIITCAKkKSE--QPLWVLVWGGIEDLAQALH 162 Algor...
WP_014020918            97 ------------SDLPKPAALRAVVKQGAIPAa--pFKGYSTsTEGSDWIIKCAKkESD--QPLWVLVWGGIEDLAQALH 160 Cyclo...
WP_015808616            96 ------------KDYPSPDALRKVTKQGRHGAa--pYIGYTTaTEGSDWIIKCASkKST--QPLWVLVWGGLEDLAQALH 159 Pedob...
PRJNA61269:NIASO_18685  94 ------------KGYPSPAALRTVCKQGRQGPa--pYAGYRTaTEGSDWIIQCARkKSP--RSLWILVWGGLDDLAQALH 157
3_pfamImport            66 ------------SDYPTPDYLRSVTKQGALEIa--pFKGYSNpTEGSEWIIRCARkDDP--RTLYVLVWGLLEDLAQALH 129
2YHG_A                 163 KVQNTRSQAQLDAFISKLRVYDILGQDN-----------AGTWLAKNF-PNLIYira-------rsvYSWQ--------- 214 Sacch...
Q7UTP2                 181 SVKSERDAEGFAEFLSKFRVYDIADQDG-----------IADWMGQEF-PGMNYvlsaarpksdkriANFRgmylt--gd 246 Pirel...
WP_022053096           194 RVRKERSESEVHKFLDKLCVYTITDQDVcggppvdyafsSHQWLRKTCgKELRFfw---------deSAWLvqn------ 258 Phoca...
CDD20463               195 TVRQERSETEVRKFLNKLCVYTITDQDVcggppvdyafsSHQWIRKTCgKDIRFfw---------ddSAWIvqn------ 259
Q3IXI2                 142 D---------DPSIAPHIRFFSIDDQDEa----------AYAYIKANFkGAFDMwvd--------nlSTFRgtyas--pa 192 Rhodo...
WP_008199949           163 D---------APEIKENIKVYWIGGPNkkw------sinAYSYIAEHH-PDLWMie---------anATYRgwfmdnesp 217 Algor...
WP_014020918           161 D---------APEIKENIRVYWIGGPNkkw------sinAYSYIAANH-GDLWMie---------anATYRgwfmdedsp 215 Cyclo...
WP_015808616           160 D---------APEIKSKIKVYWIGGPNkkw------sasSYAYIAQNF-PDLWFie---------tnGSYYgffsdhgvp 214 Pedob...
PRJNA61269:NIASO_18685 158 D---------APDIRTKIKVYWIGGPNkkw------sanSYAYIAANF-PDLWFie---------cnGSYNgffsrnntv 212
3_pfamImport           130 D---------APDIKDKLRVYYIAGPNkkw------glnAYEYIRENF-PDLWIie---------nnSTYRgwfvggnqe 184
2YHG_A                 215 ---PSDS----Y--LDNHIQSHGALGAVYPNRRYAT--------E-GDTPAFLHMANPGLNDPSVVSMGGWGGRF 271 Saccharoph...
Q7UTP2                 247 vstTSRE----W--IDSNVRQMGPLGSLYPMKTWTApnpqgclkE-GDTPSWFFFLPHGGNDPNDPTQPGWGGVF 314 Pirellula sp.
WP_022053096           259 -tlGSMN----WneYATHIQGHGHLGKVYPKNKYGV--------E-GDTPSYLHVFPNGLNNPAVGNQVGWGGYF 319 Phocaeicol...
CDD20463               260 -aiGSQN----WneYATHIQNHGNLGKIYPKNKYGV--------E-GDTPSFLHVTPNGLNDPTVCSQAGWGGYF 320
Q3IXI2                 193 ggeWTQDiikgW--HEVNARGHGALGDFFaelsgdi--fnvsgvKmGDSPTVFRFLSG---DQNDPTKESWGGEF 260 Rhodobacte...
WP_008199949           218 delKGDA----Y--YENYIQDRGELGKDFikyy-------dgniKmGDTPSLVYLMNG---DPNDPTGESWGGSF 276 Algoriphag...
WP_014020918           216 eafKAET----Y--YDNFIQGRGVMGKDFinyy-------kgeiKmGDTPSLAYVMNG---DPEDPTGESWGGSF 274 Cyclobacte...
WP_015808616           215 eklKGKN----Y--YDNYIQAAGHLGADFknyy-------kgeiKmGDTPSLLYMMDG---NPADPFKESWGGSF 273 Pedobacter...
PRJNA61269:NIASO_18685 213 eklTNTN----Y--YDNYIKGAGALGKDFknyy-------kghiKmGDTPSLLYLMDG---APGNPFKESWGGSF 271
3_pfamImport           185 ndlGNKT----F--VTNHVAGHGALGNFFakhl-------dgviKmGDTPSVAYLLKG---TPECPEKPSWGGSF 243
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