3KQ5


Conserved Protein Domain Family
TraI_2_C

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pfam07515: TraI_2_C 
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Putative conjugal transfer nickase/helicase TraI C-term
Statistics
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PSSM-Id: 400067
View PSSM: pfam07515
Aligned: 23 rows
Threshold Bit Score: 113.186
Threshold Setting Gi: 81376553
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KQ5_A        244 AHADAFLNWLKEALATNQIKVNTSDAGVHVIPEGVFLEKTGIFKQYIDLhvnvpVNLFTVYQQfgnlfgLTKLSGIDYRF 323 Coxiella burnetii
Q7VMS1         99 MSGQAFIEWLRQGIATKRLSINVKNAKLHIVKNHLFLVTPGIFTDYFNS--------KGVSYT------KKDIESLQYAF 164 [Haemophilus] ...
WP_015959334  408 gdiNNFLLWLKNHISSSG-TVNTRNGKVHVVENHLFLITPGIFKMYAAE---------ITGDT------GDGWKLAQRMF 471 Klebsiella pne...
WP_013818693  467 DQVDDFFTWLQNGIRQEVIKTNQPKARVHVVKEGVALMTPGIFQDYAVF----------KEGD------SSNWPDIQKKV 530 Methylomonas m...
CBL47078      473 DIGQKFMDWLARRLRAATIPINQKDAPIHTVPEGVLVVSPRVFREFIDFfglrhRENGTEIPI------DDAIKHVQKKL 546 gamma proteoba...
Q7N7I4        380 CIGEQFWDWLSVGLMHGGMSINTPKARIHLVGGFVFVSAPAIFFQFLSE-----KKQADGKEV------SQKWKRVQTAF 448 Photorhabdus l...
jgi:Dsui_2581 534 KDIERLMAWIQQGIGGGTISYNRASACIHFVKEGMLLISPKVFREYYQA--------AGTEAD------TTQIKRLQKLL 599 Azospira oryza...
WP_011795862  740 ELAVSFLRWIQQSLVSRELKYNEPGAAVHFVEQGMALVSPLIFRMYARE-------TVGEDQA------QELGARVQREV 806 Acidovorax cit...
WP_051582549  340 DAGSRFLQWLQREALARRMDVNTPHARIHVVEEGVLLVSPAVFKDYASQ-----------NPD------HGSWEYVQKRF 402 Ectothiorhodos...
Q4K7F0        497 SLGQGFVAWLKAGITSRKIIINDAKALVHTVDGTAMLVTPGIFKRYIQEhp--tLEQIATKNG------TVAWQQVQRAF 568 Pseudomonas pr...
3KQ5_A        324 EQLFSEypdaLKRKSKMGF--AGLIGIrRASPT---REGVLIADPNLIFTr-gEIPSATSYL-KL 381 Coxiella burnetii
Q7VMS1        165 QDLKLHkryhLPNKDSQNFwkCSVIGP-RKSSK---LVGYLIKDTEYFFGk--QVLIDNLHLtLI 223 [Haemophilus] ducreyi
WP_015959334  472 QESGLA----LRCNDDSFIwtCEVRVPqKKSSQ---LKGFLIEDPKQVLGe--KVPVNNPWL-KL 526 Klebsiella pneumoniae
WP_013818693  531 LKKNCH----VRDGQGLNVvkYQVTGA-SKSTT---VNAILFEDVSIVFAa-gSAPASNPHL-QK 585 Methylomonas methanica
CBL47078      547 EKLRQN----IRSSSGMNVhtYTINGA-NRTSK---VSGFLF-DTSLLFGh-vTVPPPNPLL-QR 600 gamma proteobacterium HdN1
Q7N7I4        449 ERLGRH-----RISSGKCFccCHLYDSaDRIGSyqrVHGYLIKSTLLYRGs--PVPEDSPFLmis 506 Photorhabdus laumondii subsp....
jgi:Dsui_2581 600 QKSGYV----AKNRPNSFLhyYRITNA-KNADRs-lVTGYLVTNPGLFFR---DVPEANAHLeAS 655 Azospira oryzae PS
WP_011795862  807 IKCGWH----MPGPNRTNIvrFAIHSRgGVAGH---LSCVVLVDPSRWVQp---VPPSNPVL-KV 860 Acidovorax citrulli
WP_051582549  403 MKLRVH----QKRPDGTNVhrYLVKGA-RRQSV---VKGILLPDTAMVFSegvEVALVNPHL-QA 458 Ectothiorhodospira haloalkali...
Q4K7F0        569 EKEKLH----EKTKKSLNIwtFNVSGP-RKTKQ---LKGYLLRDPSTIFT---EVALDNPSI-SR 621 Pseudomonas protegens Pf-5
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