Conserved Protein Domain Family
TrbM
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pfam07424: TrbM 
TrbM
This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation. This family also includes MPFK and its functional homolog kikA, which are required for efficient conjugative transfer in IncP-9 plasmids.
Links
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Statistics
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PSSM-Id: 429457
Aligned: 7 rows
Threshold Bit Score: 238.165
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
CDM25179          32 LLTGIPRLACEATLCLSSSLRPGECSPSLDHYFGILKYNrhgldWDATVAARRAFLAQCPAAA---E-PGMAERVDAISR 107
WP_011798699      27 VLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRK-----LSDTIRARANFLQLCPVAN---QtPQMQSLVSAISQ 98  Proteobacteria
Q5NWL5            29 VLSGDTRLACEAILCLSTGQRPSECTPSLDHYFGIKKKK-----LSDTLEARLSFLNKCPVAN---QtPQMSTLVRVISR 100 Aromatoleum...
jgi:CAP2UW1_4721  27 VLTGDTRLACEATLCLATSTRPSECSPSLSRYFSIHKRK-----WSDTVRARANFLSLCPVSD---QtPEMRSLVNAMAN 98 
CAP44044          30 LLTGIPRLACEATLCLSSSLRPGECSPSLDHYFDIRKYNkhgldWSATVSARRSFLSQCPASG---G-TGMSERINAISR 105
WP_012108057      22 LLTGDTRLSCEAILCLSSSVKPGECQPSLNRFFSIKEKK-----WEDTLNARKAFLKLCPVGEsgeNdAEFKKLRDNILV 96  Campylobact...
WP_011991599      23 MLTGDTKLACEAILCLSSGTRPGECSPSINKYFSIKHKK-----WSDTVNARRNFLRLCPVDGadeKdPIFADLRDNVLP 97  Campylobact...

CDM25179         108 G--AGKCDADYLNRSYADTAYKwrQRGYrydastgnrepvyevqplpTVTLTQLPAWCVAYNDHAWTyE-----LSIRYV 180
WP_011798699      99 G--AGRCDAQSLNSTMLVWTGG--DDGR-------------------TYISNQMPDFCAAYTGHAYT-DftssgTLPRYV 154 Proteobacteria
Q5NWL5           101 S--AGRCDAASLNSALQMWTSG--DGGE-------------------IYIGNRMPDYCMAYTAHAYT-Dfs--qTKPMYV 154 Aromatoleum...
jgi:CAP2UW1_4721  99 G--AGRCDAASLNVTLLVWNSWdaDGGR-------------------VLINNQMPGYCAAYTGHQYT-Dlg--dLAPRYV 154
CAP44044         106 G--AGKCDAEFLNQTYAGTAYKwrKREYggdsgrtv----yevhplpTVTLDQLPTYCVVYNNHAWTyE-----LSVRYV 174
WP_012108057      97 Yi-SEPCNTEYLNSRVEYKT-KeiCGERrcrh-----------ipisARINPNLPKSCKLLQTSKYT-D-----IKVKYT 157 Campylobact...
WP_011991599      98 NvdARKCTADYINNHPETKCVKesCGERrcrc-----------veyeYRPATKMPTGCEALIAHSYT-N-----IRPVNT 160 Campylobact...

CDM25179         181 ---GRPTMGGRWVKAVDYDAAQAKWD 203
WP_011798699     155 ---GTPERGGYWVEARDYDRALAEYN 177 Proteobacteria
Q5NWL5           155 ---GMPENGGYWVEAKDYERALAEYN 177 Aromatoleum aromaticum EbN1
jgi:CAP2UW1_4721 155 ---GTPERGGYWVDARDYNAAVARYN 177
CAP44044         175 ---GRPTMGGHWVKAEKYEAAQAKWD 197
WP_012108057     158 c-sGEFFPIDEWDKGITKNEIPKTFY 182 Campylobacter hominis
WP_011991599     161 cgtTRWYSENEWNGGKINIKISEDEF 186 Campylobacter hominis
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