Conserved Protein Domain Family
TrbM

?
pfam07424: TrbM 
TrbM
This family contains the bacterial protein TrbM (approximately 180 residues long). In Comamonas testosteroni T-2, TrbM is derived from the IncP1beta plasmid pTSA, which encodes the widespread genes for p-toluenesulfonate (TSA) degradation.
Statistics
?
PSSM-Id: 369359
View PSSM: pfam07424
Aligned: 8 rows
Threshold Bit Score: 245.872
Threshold Setting Gi: 501056601
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CDM25179           32 LLTGIPRLACEATLCLSSSLRPGECSPSLDHYFGILKYNrhgldWDATVAARRAFLAQCPAAA---E-PGMAERVDAISR 107 Castellani...
WP_011798699       27 VLTGDTRLACEAILCLSSGTRPSECTPSLSRYFNITKRK-----LSDTIRARANFLQLCPVAN---QtPQMQSLVSAISQ 98  Proteobact...
Q5NWL5             29 VLSGDTRLACEAILCLSTGQRPSECTPSLDHYFGIKKKK-----LSDTLEARLSFLNKCPVAN---QtPQMSTLVRVISR 100 Aromatoleu...
jgi:CAP2UW1_4721   27 VLTGDTRLACEATLCLATSTRPSECSPSLSRYFSIHKRK-----WSDTVRARANFLSLCPVSD---QtPEMRSLVNAMAN 98  Candidatus...
CAP44044           30 LLTGIPRLACEATLCLSSSLRPGECSPSLDHYFDIRKYNkhgldWSATVSARRSFLSQCPASG---G-TGMSERINAISR 105 Bordetella...
Ansesd:TEQUI_0115  33 LLTGDVRLACEAILCLSSGTRPSECSPSLHKYFSIFNKKk---pWK-TPLMRIDFLNLCPASH---E-VGMASLIEAIAY 104 Taylorella...
WP_012108057       22 LLTGDTRLSCEAILCLSSSVKPGECQPSLNRFFSIKEKK-----WEDTLNARKAFLKLCPVGEsgeNdAEFKKLRDNILV 96  Campylobac...
WP_011991599       23 MLTGDTKLACEAILCLSSGTRPGECSPSINKYFSIKHKK-----WSDTVNARRNFLRLCPVDGadeKdPIFADLRDNVLP 97  Campylobac...
CDM25179          108 G--AGKCDADYLNRSYADTAYKwrQRGYrydastgnrepvyevqplpTVTLTQLPAWCVAYNDHAWTyE-----LSIRYV 180 Castellani...
WP_011798699       99 G--AGRCDAQSLNSTMLVWTGG--DDGR-------------------TYISNQMPDFCAAYTGHAYT-DftssgTLPRYV 154 Proteobact...
Q5NWL5            101 S--AGRCDAASLNSALQMWTSG--DGGE-------------------IYIGNRMPDYCMAYTAHAYT-Dfs--qTKPMYV 154 Aromatoleu...
jgi:CAP2UW1_4721   99 G--AGRCDAASLNVTLLVWNSWdaDGGR-------------------VLINNQMPGYCAAYTGHQYT-Dlg--dLAPRYV 154 Candidatus...
CAP44044          106 G--AGKCDAEFLNQTYAGTAYKwrKREYggdsgrtv----yevhplpTVTLDQLPTYCVVYNNHAWTyE-----LSVRYV 174 Bordetella...
Ansesd:TEQUI_0115 105 G--AGYCDANILNTQNRRKYIKhiETGKkiyngtisdyedevitkeiEVIEDTKPAYCINYENHEWT-D-----VDVTYI 176 Taylorella...
WP_012108057       97 Yi-SEPCNTEYLNSRVEYKT-KeiCGERrcrh-----------ipisARINPNLPKSCKLLQTSKYT-D-----IKVKYT 157 Campylobac...
WP_011991599       98 NvdARKCTADYINNHPETKCVKesCGERrcrc-----------veyeYRPATKMPTGCEALIAHSYT-N-----IRPVNT 160 Campylobac...
CDM25179          181 ---GRPTMGGRWVKAVDYDAAQAKWD 203 Castellaniella defragrans 65Phen
WP_011798699      155 ---GTPERGGYWVEARDYDRALAEYN 177 Proteobacteria
Q5NWL5            155 ---GMPENGGYWVEAKDYERALAEYN 177 Aromatoleum aromaticum EbN1
jgi:CAP2UW1_4721  155 ---GTPERGGYWVDARDYNAAVARYN 177 Candidatus Accumulibacter phosphatis clade IIA str. UW-1
CAP44044          175 ---GRPTMGGHWVKAEKYEAAQAKWD 197 Bordetella petrii
Ansesd:TEQUI_0115 177 ---GDKFEGGKWADPLDREKVMKEVE 199 Taylorella equigenitalis MCE9
WP_012108057      158 c-sGEFFPIDEWDKGITKNEIPKTFY 182 Campylobacter hominis
WP_011991599      161 cgtTRWYSENEWNGGKINIKISEDEF 186 Campylobacter hominis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap