2P2U


Conserved Protein Domain Family
Phage_Mu_Gam

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pfam07352: Phage_Mu_Gam 
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Bacteriophage Mu Gam like protein
This family consists of bacterial and phage Gam proteins. The gam gene of bacteriophage Mu encodes a protein which protects linear double stranded DNA from exonuclease degradation in vitro and in vivo.
Statistics
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PSSM-Id: 429422
Aligned: 45 rows
Threshold Bit Score: 56.506
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2P2U_B           16 RQAEGALAEIATIDRKVGEIEAQXNEAIDAAK-------ARASQKSAPL-----------LARRKELEDGVATFATLNKt 77  Desulfovibri...
WP_013404676     26 SKANWALRKIKHLKKKKKENKEFAKSEIEAIQkeideisEWLESENSSL-----------DNDIDYMEGMLRIYGEQLKd 94  Halanaerobiu...
WP_015326140     13 HKANWTLKKIRKLEEEKAKNKDFAEQEIAEIE-------EWLAAENKTL-----------DNKIDFFQSLLTEYALNLKe 74  Halobacteroi...
Q2FX32           24 DSANWVFKKLDAITTKENEINDLANKEIERIN-------EWKDKEVEKL-----------QSGKEYLQSLVIEYYRIQKe 85  Staphylococc...
CAL83226         13 KGASWALRKIKECKESILEKEELAKIEKERIE-------EWLNNETKSD-----------LATLEYFNGLLMQYYKVIKq 74 
tigr:NT01CX2193  30 ESANWCFRNIRALKEQIETNKALADAERFRID-------SWEKKENEGA-----------LNSISYFESLVTEYFKEERt 91 
Q5WIA2           28 ESLNWAFRKIAALKTQMEETDAIAAKEIERIH-------LWAAEQHKPV-----------KQSIEFFEGLITQYHMQLLe 89  Bacillus cla...
Q65ER1           31 NSLNWAFRKIAALKTQEKEIKALAATERQRID-------EWETQELKPL-----------ADNLAFFEKLVSVYHSKQLv 92  Bacillus lic...
WP_020457809     30 DSANWCLRKIKALKQEIEENKRIADAEIQRIQ-------SWLKEVTEPL-----------ERSIQFFESLLIEYHMNIYa 91  Acetivibrio ...
Q9CGS7           14 SELNWVLGKYKEHQIQCDEYEIQAEESRKAIE-------EKYNAELYEIemrrlklqaeeQKEMDYFKGLAEQYYLTLE- 85  Lactococcus ...
2P2U_B           78 exfKDRK-SLDLGFGTIGFRLSTQIv-QXSKITkdxTLERLRQFGiSEGI--RIK--EDVNKEAX--------------- 136 Desulfovibri...
WP_013404676     95 q-dPELK-THKLPFGQLQFRKQRDKw-KYDDQK---LLEFA-ERNlKDTI--KIK--KKVDKRKLkskvkvvg---tkav 160 Halanaerobiu...
WP_015326140     75 k-dEEFK-TKSLPAGELQFRKQRAKw-KYDQEQ---LLASVKAMGlDELV--KIK--ETVNKRELkkkievke---gkai 141 Halobacteroi...
Q2FX32           86 q-dSKFK--LNTPYGKVTARKGSKViqVSNEQE---VIKQLEQRGfDNYV--KVT--KKLSQSDIkkdfnvte---ngtl 152 Staphylococc...
CAL83226         75 n-dPKAR--ITTPYGQVTSRKNKKWnyGNEET----LLKYLNSNGyKNLI--RTK--QEINKTDLkesflikd---givl 140
tigr:NT01CX2193  92 k-dNKFK--LSTPYGKVSSRKIEKYnwDDKEA----LLNYLKENKqDKLI--RVT--EEINKTEFkkvykh-------gi 153
Q5WIA2           90 e-nPKAK-TLKTPHGKSKSTTRKPApvAMDKSK---LLEHVKEAGmTEFI--K----EDIRWGDFkktlnvevvkgkvvi 158 Bacillus cla...
Q65ER1           93 q-dPKAK-TLSTPYGKSKSRTIKEQpkPTDKDQ---LLKHVKEAGlTEFI--K----EDVKWGDLkkslsikevdgkkvv 161 Bacillus lic...
WP_020457809     92 e-dPSKK-TIKLPYGTLKARAQQPEf-CRDDEK---LVNWLKQNGmTEFV--KVI--EKPEWNELkkkvkvig---nsvv 158 Acetivibrio ...
Q9CGS7           86 -----TKsPKKTINGSVRFSKKENVsyDDN------LLSELKEKGfGKFItaKTKttESVDKKALkafvkdg-----gql 149 Lactococcus ...
2P2U_B          137 ----QgwpderLEXVGLKRRT-TDAFYIEI 161 Desulfovibrio vulgaris
WP_013404676    161 vadtG------EVIDGITVLKrGEKFKVKI 184 Halanaerobium hydrogeniformans
WP_015326140    142 navtG------EIIEGIQVINrGEKFKINI 165 Halobacteroides halobius
Q2FX32          153 idanG------EVLEGASIVEkPTSYTVKV 176 Staphylococcus aureus subsp. aureus NCTC 8325
CAL83226        141 dkntG------EVIPEISIVE-EENINVKV 163
tigr:NT01CX2193 154 nketG------EILPG-VIVEeKESISVKV 176
Q5WIA2          159 vdslG------QRVEGVELDQgGTTFKVEV 182 Bacillus clausii KSM-K16
Q65ER1          162 vdenG------QVVPGVEIEPaSTSFKVEV 185 Bacillus licheniformis DSM 13 = ATCC 14580
WP_020457809    159 yeetG------EVIDGITVQErPPKFTVEV 182 Acetivibrio thermocellus
Q9CGS7          150 vsedG------EIVEGFKFDK-TEEFTVKV 172 Lactococcus lactis subsp. lactis
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