6RI3,2VXA,3OQT,3ONR,2CZ8,4B2H


Conserved Protein Domain Family
Dodecin
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pfam07311: Dodecin (This model is not part of the current CDD release)
Dodecin
Dodecin is a flavin-binding protein,found in several bacteria and few archaea and represents a stand-alone version of the SHS2 domain. It most closely resembles the SHS2 domains of FtsA and Rpb7p, and represents a single domain small-molecule binding form.
Links
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Statistics
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PSSM-Id: 517656
Aligned: 165 rows
Threshold Bit Score: 45.8546
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
6RI3_A         5 TYRVTDIVGTSPEGVDQAIRNGINRASQTLHNLDWFEVVEVRGQLNDGQIAHWQVTMKVGFR 66  Streptomyces davaonensis
WP_013234369   3 ILKVIEVLAESDSSWEDAAQNAVRKVAKSVTHIKSIYVNEMSACVDGDKIVKYRINAKISFV 64  Herbaspirillum seropedicae
CAL62500       3 LLKVIEVLAESDKSWEDAAQMAVKTAAKTVHNIKSIYIKEMEASVDKDKITHYRINAKISFL 64 
CAL62654       3 fLKVLEALAESDKSWEDAAQHTRHHGAKTMHNIKSIYIKEIEASANQNKIVKYRSHAKNSFl 64 
WP_013234372   3 TIEVIEVLAESDSSWRQAAQNAVHGAAVKIHNLRSLYVSDMEAVVADNKITRYRINAKISFL 64  Herbaspirillum seropedicae
WP_013305269   3 VLKVIEVLANSDKSWEDAAQTAVEQASKSVKNIRSVYINEQSATVKDGKMDNYRVNVKITFE 64  Maribacter sp. HTCC2170
16_pfamImport  1 ILKVIEVLSNSDKSWEDATKKAVVQASKSVKNIKSVYVQDQSAIVNDGEVTEFRVNLKITFE 62 
4_pfamImport   1 VLKVIEVLANSDKSWEDAARKAVKHAGKSVKNIRSVYINEQNAVVKGDEITEFRVNAKITFE 62 
WP_025436787   3 VVKVIEILAESNESWEAAAQAAVTEVSKTVRNIESVYIENMQAIVKDSKIVKYRVNAKISFL 64  Peptoclostridium acidaminophilum
WP_013159747   3 VVKVIEIIAESTKSWEDAAQQALEEASKTVRGIRSIWVQDLQAIVEDGNIVAYRANCKLSFV 64  Allomeiothermus silvanus
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