Conserved Protein Domain Family
TraP
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pfam07296: TraP 
TraP protein
This family consists of several bacterial conjugative transfer TraP proteins from Escherichia coli and Salmonella typhimurium. TraP appears to play a minor role in conjugation and may interact with TraB, which varies in sequence along with TraP, in order to stabilise the proposed transmembrane complex formed by the tra operon products.
Links
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Statistics
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PSSM-Id: 254144
Aligned: 3 rows
Threshold Bit Score: 283.076
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q93GN8         1 MGNNRLNnlkgravlyRIAGLLRWLIWGVKYAVIWPLATTAIVVILLFRTGDTTPGQQMAQEIGRVRAMApsgmFPVRDC 80  Salmonella ente...
WP_004152599   1 MAKSLIT---------AVLSVLRWAHWLVKCAVVYPLAMMMLLVVLVFRTGPYTFGQTLVKTVESVQQEG----YVIQDC 67  Gammaproteobact...
P41068         1 MANNMSSrqachaaryVVARVLRGLFWCLKYTVILPLATMALMALFVLWKDNTTPGKLLVKEINFVRQTApagqFPVSEC 80  Escherichia col...

Q93GN8        81 PDP----AFTVSSPVPLNLTENCPLKITGAEEYAADIDQSLSQTGWLLWGMLALLYTAVAVMIGDRPYRHNPL----TYA 152 Salmonella ente...
WP_004152599  68 TGPkelnSDAVNAPLPPLLQEDCTTVITDAAGYAAYIDQSYTHNILWLWLLMAVVFTGIAVVFRRTPVRRGIIrkngVVV 147 Gammaproteobact...
P41068        81 W------FSSSDSSGRSEIQGICHYRAADAADYVRETDRSLMQLVTALWATLALMYVSLAAITGKYPVRPGKMkcirVVT 154 Escherichia col...

Q93GN8       153 YDTATNNLKYIDKENEIrtlkvntnGQVSYS-----GNKEAKKEGDKNEHT 198 Salmonella enterica subsp. enterica serovar ...
WP_004152599 148 GESVLGSSGLILARSDV--------SQIKRV-----YDEMSPGEGDKFVRT 185 Gammaproteobacteria
P41068       155 ADEHL---------KEVytedaslpGKIRKCpvylpDDRTNRNNGDKNEHA 196 Escherichia coli K-12
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