6BP6


Conserved Protein Domain Family
COMM_domain

?
pfam07258: COMM_domain 
COMM domain
The leucine-rich, 70-85 amino acid long COMM domain is predicted to form a beta-sheet and an extreme C-terminal alpha- helix. The COMM domain containing proteins are about 200 residues in length and passed the C-terminal COMM domain.
Statistics
?
PSSM-Id: 399913
View PSSM: pfam07258
Aligned: 236 rows
Threshold Bit Score: 26.4544
Threshold Setting Gi: 0
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
6BP6_A          7 LPRLVDLDWRVDIKT--SSDSI-S--RXAVPTCLLQXKIQEdpslcgDKpsi---saVTVELSKETLDTXLDGLGRIRDQ 78 
A0DV65        128 IGKAVEFHYGISKFIv-SESVVpQkqIEGNRYIDTNITFQH------DNgkq---ecCQFVMFPEQFEDMLNSFKKAQKL 197 Paramecium tet...
A0C179        124 LGKLKELKWTVN-----QYNGDvKypNLKKLYILLEFHIQD------EKgnl---qkQIINLTIQEFKMLQMEFKEIGDI 189 Paramecium tet...
XP_001016605  125 LGKLIDMKWNVCSFL--SDQKN-K--EINKIYVKLELTVQT------STgev---ihDQFALSLQEFKAFKEIISEISVV 190 Tetrahymena th...
19_pfamImport   1 AGQFLNFLWHLKVIA--HNMIC-E--RMKYPKTKVALLVSL------NSstv---ltICFFFFLP--QNFFRQFKEMAAV 64 
XP_003218706  135 VGQLIDFQWKLGMAV--SSGNC-K--SLKSPYVTIAMKVAD------ASghi---tsKTFEMTVSQFQNFYSQFKEMASI 200 green anole
XP_002600954  134 IGQLIDMKWRLGVAI--GSDTC-R--NLNSPFVAMTIKIAE------PSgnv---itKSFEMTVPEFQNFSKQMKDMAAM 199 Florida lancelet
EDO40437      128 VGQLVDMGWKLSMGM--SSSSC-R--SLNAPFITAAITVAS------PSgdl---ttKSLEMTILEFKKFSSHLREIASV 193 starlet sea an...
XP_003383596  129 VGELVSMDWKLGVAM--SSNGC-K--ALNVPYVTLQLKVME------SPgev---kvHSIELSLKQFQNFAAQLKDMSNA 194 Amphimedon que...
XP_001030045  128 ISNVQDLKYSVNKFIlsKEKQFvEkeNRTNESLFSNIQIKY------NDqpqrqsktVEFVAFPSKLEELIFELEKAQQI 201 Tetrahymena th...
6BP6_A         79 LSAVAS 84 
A0DV65        198 MMQL-- 201 Paramecium tetraurelia
A0C179        190 LRSFM- 194 Paramecium tetraurelia
XP_001016605  191 SEQYNV 196 Tetrahymena thermophila SB210
19_pfamImport  65 LETV-- 68 
XP_003218706  201 LETV-- 204 green anole
XP_002600954  200 LETV-- 203 Florida lancelet
EDO40437      194 LETV-- 197 starlet sea anemone
XP_003383596  195 LETV-- 198 Amphimedon queenslandica
XP_001030045  202 LNKY-- 205 Tetrahymena thermophila SB210
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap