5HY7


Conserved Protein Domain Family
SF3b10
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pfam07189: SF3b10 (This model is not part of the current CDD release)
Splicing factor 3B subunit 10 (SF3b10)
This family consists of several eukaryotic splicing factor 3B subunit 10 (SF3b10) proteins. SF3b10 is a 10 kDa subunit of the splicing factor SF3b. SF3b associates with the splicing factor SF3a and a 12S RNA unit to form the U2 small nuclear ribonucleoproteins complex. SF3b10 and SF3b14b are also thought to facilitate the interaction of U2 with the branch site.
Links
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Statistics
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PSSM-Id: 517601
Aligned: 68 rows
Threshold Bit Score: 80.659
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
5HY7_D        6 RNQQELERLQAKYVGTGHPDTTSWEWKTNIHRDTYSSIVGHPPLLSYMALAQ--NEPVAKFRVQMIRKMLQPVG 77  Thermochaetoides therm...
XP_002999351  6 KEELIYEDMRKKHPGVGSARTTKEEWSNTISKDTYASLAIHQNLLEYYTLASg-FPSKRDAQLTLLRKLANPpk 78 
XP_003959428  6 RQRQVFQTFKQKYVGLGTEDTMKEDWLSNVRKDTYTNIQGHSAMLEYVTIATdgMTSKKDMRMSLLKKMVDtee 79 
XP_003677465  6 RQQHVYQTLKQKHLSLGDENTTKEEWLTNVQRDIYNSIQGHSGLLEYTALNQqgLTSSQMLRVSMIKKMAQKAE 79 
XP_013935007  6 REKQLYEALKSKHIGLGNEETTRTEYISNIKRDTYASLVAHPAMLEFLSNTY--NKPRQIVHTEMIEKMIRPME 77 
XP_001486189  6 KDARLYSANKARYIGLGDPDTPREEFVTNIHRDTYASLGQHDSLLTYTAVAM--NRSPEVVRQQMIKKMVQPKG 77 
Q6BLV4        6 KDINQYNQLKSKYIGLGNADITREEFMTNVNRDIYSSLAQHDNILYYNSVII--NEPMELLRQKMIKKMASPIQ 77  Debaryomyces hansenii
XP_036665082  6 REKNQYALLKQKYPGIGNADTTRDEFLTTTYNDTIASLAHHKHINYYNSIVT--NKHPNLMKQEMIKKIKSDAt 77 
EDK42177      6 REKHQYALLKSKYDGIGNSDTTSKEFQTTIYNDTFASLAHHKHLLLHNAVIR--NEHPELVRQEYLKKL-KPMp 76 
XP_013021254  6 RSQAKLEQLQARFVGVGHSSTTKYEWMVNQHRDALSSIVGHPPLLAYMSTAL--GESRTQVRQQMLEKMIMPCG 77
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