Conserved Protein Domain Family
PhaC_N

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pfam07167: PhaC_N (This model is not part of the current CDD release)
Poly-beta-hydroxybutyrate polymerase (PhaC) N-terminus
This family represents the N-terminal region of the bacterial poly-beta-hydroxybutyrate polymerase (PhaC). Polyhydroxyalkanoic acids (PHAs) are carbon and energy reserve polymers produced in some bacteria when carbon sources are plentiful and another nutrient, such as nitrogen, phosphate, oxygen, or sulfur, becomes limiting. PHAs composed of monomeric units ranging from 3 to 14 carbons exist in nature. When the carbon source is exhausted, PHA is utilized by the bacterium. PhaC links D-(-)-3-hydroxybutyrl-CoA to an existing PHA molecule by the formation of an ester bond. This family appears to be a partial segment of an alpha/beta hydrolase domain.
Statistics
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PSSM-Id: 517591
Aligned: 21 rows
Threshold Bit Score: 256.813
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q2RRN2       107 DRRFKDEAWDNNEVFDFIKQTYLLTARWMQGVVRDVDgMDRHTAEKVDFYTRQFVDAMAPSNFALTNPEVIRETLDSGGE 186 Rhodospirillum ...
Q87GW3        95 DKRFSNEAWQNEAMYSFIKQSYLLFSKTYLDTIESLEgLDEKTKERIIFFSRQAINALSPSNFIATNPELLKLTLEQNGQ 174 Vibrio parahaem...
WP_011706255  94 DRRFKADAWSEQPIYDYLKQSYLLTAKHLLASVDALEgVPQKSRERLRFFTRQYINAMAPSNFLATNPELLKLTLESDGQ 173 Aeromonas hydro...
Q89NV2        86 DRRFNATEWRDDAAYSLLKQCYLLNSRYCVDFVEALD-LDEKEKHRLRFFTRQLIEAMSPTNFLATNPDVIKLATDSEGQ 164 Bradyrhizobium ...
Q9ZHI2        72 DRRFASPEWNEHPFYNFLKQSYLQTSKWMMELVDKTQ-LDEDAKDKLAFATRQYLDAMSPSNFMLTNPDVVKRAIETKGE 150 Chromobacterium...
WP_012205434 102 DKRFNTESWAGNPLTAATAATYLLNSRMLMGLADAVQ-ADDKTRNRVRFAIEQWLAAMAPSNFLALNAEAQKKAIETQGE 180 Delftia
Q88D23        76 DARFSDPTWSQNPFYRRGLQAYLAWQKQTRQWIDESH-LNDDDRARAHFLFNLINDALAPSNSLL-NPLAVKELFNTGGQ 153 Pseudomonas put...
WP_016495137  76 DSRFADPSWQHNPFYRRGLQVYLTWQKQLGAWIEESD-LSDDDRARARFVLAQLSDALAPTNSLL-NPLAVKELFNTGGF 153 Metapseudomonas...
3_pfamImport   2 DARFQDPSWRLNPFYRRTLQAYLAWQKQLLAWIDESN-LDCDDRARARFLVALLSDAVAPSNSLI-NPLALKELFNTGGI 79 
Q3J0X7       110 DRRFSNPLWQTHPFFNYLKQQYLMNAEAVNQAVEALEhIEPSDKKRVEYFSRQIVDLFSPTNFFGTNPDALERAIATDGE 189 Rhodobacter sph...
Q2RRN2       187 NLVKGLEHLLHDLERGKGQLRISMTDESAFEVGVNVAATPGKVIARNSLMELLQYTPTTEQVHKRPLLIIPPWINKYYIL 266 Rhodospirillum ...
Q87GW3       175 NLLAGLEQLKEDVESSADILKVRMTNNNAFRVGDDVATTAGDVVFQNELFELIQYRPLTEKVNATPLLIVPPFINKYYIL 254 Vibrio parahaem...
WP_011706255 174 NLVRGLALLAEDLERSADQLNIRLTDESAFELGRDLALTPGRVVQRTELYELIQYSPTTETVARTPVLIVPPFINKYYIL 253 Aeromonas hydro...
Q89NV2       165 SLKAGLENLMSDLGRG----SLTITDEEAFEVGKDVAASRGAVVFENELFQLIQYAPATEQVAARPLLIVPPCINKFYIL 240 Bradyrhizobium ...
Q9ZHI2       151 SLVEGMKNMLDDFQKG----HISMSDESKFEIGKNLVVTPGQVVFRNELIELIQYTPTTDKVYEKPLLFVPPCINKYYLM 226 Chromobacterium...
WP_012205434 181 SLAQGVANLLADMRQG----HVSMTDESLFTVGKNVATTEGAVVFENELFQLIEYKPLTDKVHERPFLMVPPCINKFYIL 256 Delftia
Q88D23       154 SLVRGVAHLLDDLRHNDG--LPRQVDERAFEVGVNLAATPGAVVFRNELLELIQYSPMSEKQHARPLLVVPPQINKFYIF 231 Pseudomonas put...
WP_016495137 154 SLIKGLSHLVDDLLHNDG--MPSQVSKHAFEIGRNLANTPGAVVFRNELLELIQYKPMSEKQYLRPLLVVPPQINKYYIF 231 Metapseudomonas...
3_pfamImport  80 SLLNGVRHLLEDLVHNGG--MPSQVNKTAFEIGRNLATTQGAVVFRNEVLELIQYKPLGERQYAKPLLIVPPQINKYYIF 157
Q3J0X7       190 SLVQGLENLVRDIEANNGDLLVTLADPEAFQVGQNLATTEGSVVYRNRMFELIQYKPTTETVHETPLLIFPPWINKFYIL 269 Rhodobacter sph...
Q2RRN2       267 DLRPKNSFIKWA 278 Rhodospirillum rubrum ATCC 11170
Q87GW3       255 DLTAKNSMVRWL 266 Vibrio parahaemolyticus
WP_011706255 254 DMRPQNSLVAWL 265 Aeromonas hydrophila
Q89NV2       241 DLQPANSFVRFA 252 Bradyrhizobium japonicum
Q9ZHI2       227 DLQPDNSMVRHF 238 Chromobacterium violaceum ATCC 12472
WP_012205434 257 DLQPDNSLIRYA 268 Delftia
Q88D23       232 DLSATNSFVQYM 243 Pseudomonas putida KT2440
WP_016495137 232 DLAPDKSFVQYA 243 Metapseudomonas resinovorans
3_pfamImport 158 DLSPEKSFVQYA 169
Q3J0X7       270 DLKPQNSLLKWL 281 Rhodobacter sphaeroides 2.4.1
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