Conserved Protein Domain Family
B9-C2

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pfam07162: B9-C2 (This model is not part of the current CDD release)
Ciliary basal body-associated, B9 protein
The B9-C2 domain is found in proteins associated with the ciliary basal body. B9 domains were identified as a specific family of C2 domains. There are three sub-families represented by this family, notably, Mks1-Xbx7, Stumpy-Tza1 and Tza2 groups of proteins. Mutations in human Mks1 result in the developmental disorder Mechler-Gruber syndrome; mutations in mouse Stumpy lead to perinatal hydrocephalus and severe polycystic kidney disease. All the three distinct types of B9-C2 proteins cooperatively localise to the basal body or centrosome of cilia.
Statistics
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PSSM-Id: 517588
Aligned: 117 rows
Threshold Bit Score: 96.0822
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002956873   602 LLLLGEIQSAADFPMDr----LYIEYVVRWdpD------------VWELTTtsncqq----------tqpgiiQGVTHIS 655 
XP_020306560   277 LVYLIDIERAVNFPYDg----ICIEYKVDL--PlqcalidlssvhRWSTIIds------------------spQGKDDVA 332 
NP_001070841   310 LIVNGEIVSAQGYEYDn----LYVHFFVDLp-N------------NWSSVSsh------------------clSGVTQTC 354 
20_pfamImport    1 LLVNGEIVSAKGYEYDn----LYVHFFFELp-N------------DWSSLPsq------------------slSGVTQTC 45  
XP_046447683    25 HVVNVTIETAKEFHNCn---hLYVRYVVDAp-A------------DWILAEpk------------------nlHGVTHQS 70  
A0CZW4          34 VNIFGEILEASNFDNSq----IFLQWKFKIp-P------------GWDLDDnelleldqkeyediqleewnriQSITQQS 96   Paramecium t...
XP_004034955   164 INIIGEIMQAYDFDIEn----LYIEYEFVLq-D------------NWKPDYedlqmiskkps-eetkrewnmlNSITQAA 225 
XP_002894860   178 MMISLEVAA---VDNPqttdsIFVEYELELpgra--------ghsQWKLQPgny----------------trkRGKTPLS 230 
XP_018669336   316 LNVYGEVVSAQSFQQNd----LHVEFLLDVp-R------------DWSCDPaq------------------llSGCTHTC 360  vase tunicate
XP_002117292   306 VNIFGEINMAKNFEYNd----IYIHYCLYLt-T------------EWKTRDsd------------------viAGFTQIS 350  Trichoplax a...
XP_002956873   656 RVTVYPPdpatdtpprdVAH----FAHPLELEWVSRpaavpepvlgagggqgpgaagglapNAY-------------PCM 718 
XP_020306560   333 I-----------------------FSQPVCVTLTINeerq------------------ffeNFHw------------PRM 359 
NP_001070841   355 RTRsie--------kedVAF----FSYPFSFETFFHkedesd-----------------------------gslpqwPVL 393 
20_pfamImport   46 RTRtvg--------renAAF----FSYPFNFEAFFRkedete-----------------------------dsvpqwPVL 84  
XP_046447683    71 RAGNDSSn---------------hFGHRFTLDVSKSwqhsssse--------------------------tpdliptPLL 109 
A0CZW4          97 KVNTIKNdd-------gTITakahFCFPFDLQLQVD-------------------------ENElnf-------gkfPQL 137  Paramecium t...
XP_004034955   226 SPTIQKYtqngk-------qivtnYCFPFDIQLQTSseti------------------tecKKF-------------PFM 267 
XP_002894860   231 LHQRSEYpg-------cLTSvafgWHQHFNLKLVKD-------------------------EALngadegdddivpcPVL 278 
XP_018669336   361 RTTlvd--------dveFAY----FCQPFHYHMFLDmenike-----------------------------feplewPRI 399  vase tunicate
XP_002117292   351 KCKgdk---------ekTAH----FGHPFEFEITYEkanfnq-----------------------------vgvsewPQL 388  Trichoplax a...
XP_002956873   719 FFQVCTLDTLNRYTSQGYGWLAlgthhpVP---GSETHVVRTWKPLg-----T------IRDRQAEFFVG--GSPE--LA 780 
XP_020306560   360 IFRLCGEDYWGRFFVNGFGQLT------LPprpGRYQFDIKCWRYQr-----KhdrksmLFENFISEMADf-EQAElnLA 427 
NP_001070841   394 YFKVLSLDFWQRFRTEGYGYLV------IPstsGRHRMTCRTWRAVq----rG------TVAELRRFFIG--GAPE--LE 453 
20_pfamImport   85 YFEVLSLDFWQRYRNEGYGYVV------MPatpGHHTVTCTTWRPVr----mG------TVAELRRFFIG--GAPE--LE 144 
XP_046447683   110 LLEVYDVNMWNRQKSVGYGFTH------VPltpGSYSIAIPTWRPYi----tE------TSLQLREYFLG--LAPQ--IE 169 
A0CZW4         138 LVQVSSMDSWERNYIQGYGFIE------IPhtpGFHEITMKTYRPNd-----D------LYTRVYEFFLG--GGTK--VK 196  Paramecium t...
XP_004034955   268 FLILHSLDSWGRKRLEGYGFCE------VPnkpGTHEIIVKTWTPCq-----S------LYAKIHEFFLG--GQTK--LY 326 
XP_002894860   279 HLSVYSRDSWRRKRTQGHGEIK------LgncsGFYDSDVPIRKPIt-----S------ISDRMEELFLGidES----IE 337 
XP_018669336   400 FVHVISSDTWGRRRTEGYGYLT------IPstpGTHTYTVQCWRPLgnagypA------IAAELRRFFIG--GNPE--LE 463  vase tunicate
XP_002117292   389 FIEVVSCDSWQRYRIEGYGYTL------IPqapGMHKIEIQTWRPVa----pD------LVSEMRRFFIG--GAPE--LN 448  Trichoplax a...
XP_002956873   781 Dlay--lttP-----TGFNGk-iLNKYGFKTET-IGAIKVRLHTV 816 
XP_020306560   428 Se------------sTMCKEgpiASSIGLDKTS-SGTLKINVQCI 459 
NP_001070841   454 Disy--vriP-----GTFKGe-rLSRFGFRTQT-TGSVTFTLNCI 489 
20_pfamImport  145 Dvsy--vrvP-----GTFKGe-rLSRFGFRSET-TGRVTFALHCI 180 
XP_046447683   170 Niky--agiPnd--nHNNESpsvLGRFPLGTET-SGSVQVRFDTM 209 
A0CZW4         197 Dld----siSnafyfDKQNQpkvLNRFPIDTES-SGDIKIRVNVS 236  Paramecium tetraurelia
XP_004034955   327 Di-------KklhkqNVFSA---IDRFNIKTDS-RGSVKVRFNIG 360 
XP_002894860   338 DveltrgqlRevntdDSPLStmiTSRLGQKSEStGTTVRVRCNIV 382 
XP_018669336   464 Disy--vavP-----STFEGn-rLNKYGVRTES-TGSVTIKFNSI 499  vase tunicate
XP_002117292   449 Dity--vshP-----AGSDGp-cLSKYGLKTAS-SGSVTVKMNVL 484  Trichoplax adhaerens
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