2G3W,7TCB,3C0U,2OT9


Conserved Protein Domain Family
YaeQ

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pfam07152: YaeQ (This model is not part of the current CDD release)
YaeQ protein
This family consists of several hypothetical bacterial proteins of around 180 residues in length which are often known as YaeQ. YaeQ is homologous to RfaH, a specialised transcription elongation protein. YaeQ is known to compensate for loss of RfaH function.
Statistics
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PSSM-Id: 517581
Aligned: 99 rows
Threshold Bit Score: 164.207
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2G3W_A         2 ALTATVRRAELQISDXDRGYYANHSLTLAQHPSETDERLXVRLLAFALFADDRLEFGR-GLSNDDEPDLWRRDYT-GDPD 79  Xanthomonas citri
Q2IP88         2 ALPSTLHQLDLQLAHVDRGVDRALSLRIARHPSETMERVWLRALALAWQWEEGIAFGP-GLCEPDAADVLAQRPD-GRAS 79  Anaeromyxobacte...
WP_012240994   2 ALPSTRMDFRIDLSHVDRGREASERVIVARHPSESAEHVMLRVLAYCLFHEEGLAFGP-GLCDAEGADLWTRDPA-GRVL 79  Sorangium cellu...
Q6MN76        29 AQPSKLYRFRIDLSDIDRGIYEQLDFRLAMHPSESMPYMLTRALAYACNYSQDLQFSAqGLGDPESAALSHSDATsGRTL 108 Bdellovibrio ba...
7_pfamImport   2 AIGATIHTFEVQLADVDRGVYEDLSLRVAQHPSETDAYMVTRVLAYCLELEEGIAFSAgGVSTGEEPAILVKDLT-GLIT 80 
WP_013807158   2 ALGATMFSFAVDLADVDRGVYEHLDLRVARHPSETSDFMLTRLLAYLLEYQEGIAFSEgGVSSTGEPAVLVRDLT-GRIT 80  Hoyosella subflava
WP_014983733   2 ALSATLHNFTVQLADVDRDVYQELDLRLARHPSETAEFMLTRLLAYCLEYQEGIAFSDgGVSSTEEPAVLVRDLT-GRLL 80  Nocardia brasil...
Q5Z0L2         2 ALNATMHSFAIQLADVDRGVYTDMEVRVARHPSETAEFMLTRLLAYCLEYTEGIAFSDgGVSATDEPAVAVRDAT-GRLL 80  Nocardia farcinica
Q39UW7         2 ALPSTIYKTSIQLSDIDRGVYESLQATVAKHPSETDERLVARLLAWAIFHEPELSFTR-GLCVGEEPDLWVKGPD-GRVR 79  Geobacter metal...
WP_011734489   2 ALPSTIYRTQLELSDIDRGMYATIQTTAAQHPSETGERLVARLLAMAIFYEPELTFTK-GLCAAEEPDIWVVGPD-GRTR 79  Pelobacter prop...
2G3W_A        80 LWIDLGQPDESRVRKACNRSREAVVIGYg--GQATETWWKKHAN-AXGRYRN----LRVIELDSQATEALGALIQRGXRF 152 Xanthomonas citri
Q2IP88        80 LLVRVGRPAPERVARDVAQNAGARVAVLfegPRRMEAFLQEARElRLDRLAR----AELAALDPDLLGALAAHEDRRLKA 155 Anaeromyxobacte...
WP_012240994  80 TWIECGAAPFEKLKRVVQHNPGVAVHALfsdARRRDELVSGARE-AASRASKvtgaISLSTVDHRLVAALAENTGLRRKW 158 Sorangium cellu...
Q6MN76       109 LWIEIGNPSPKKLHKASKASQAVKIYTY---KDASQILRDCEKE-NVHQPEK----IEIYQLDDKFLTTLGEESSREFRF 180 Bdellovibrio ba...
7_pfamImport  81 AWIEVGAPDAQRLHLGSKRADRAAVYTH---RDPAKLLATWRGK-TIHRSQD----IVVRSFDSKFIDAAAQALTRRNTM 152
WP_013807158  81 AWIEVGAPDADRVHRGSKLAGRAAVYTH---RDPKKVRMQLVGK-GIHKAEE----IPVYSFDSHFIDAAVAAIERRNTF 152 Hoyosella subflava
WP_014983733  81 AWIEVGAPDAERLHRGSKAAERTAVYTH---RDPAKVLAQLAGK-RIHRAAE----IPLYSFDRDFIDAAVAAVERRNTV 152 Nocardia brasil...
Q5Z0L2        81 CWIEIGAPDAERVHRGSKAAERVAIYTH---RDPAKVLAQLRGK-RIHRAEQ----IPLYALDRAFIDAAVAAIERRNTL 152 Nocardia farcinica
Q39UW7        80 FWVEVGLPESDRIIKASRHAEKVALLAC---GRALANWDQQHLP-RLTGLPN----LTVVSLDQAFITTLAARLERSITW 151 Geobacter metal...
WP_011734489  80 LWVEVGLPESDRIIKASRHAERVCLLAC---GRALASWDQQHLP-KLKKLAN----LSIVGVDQGFIAALSSRLERSITW 151 Pelobacter prop...
2G3W_A       153 DVIIQDGEVQXLADHGSVTLTP 174 Xanthomonas citri
Q2IP88       156 ALTIVSDHLYLDVAGGSVdgpl 177 Anaeromyxobacter dehalogenans 2CP-C
WP_012240994 159 AVTIVGDHLYIEADGSTLdgev 180 Sorangium cellulosum
Q6MN76       181 SLMVQEGSLTITRGEEILNSEf 202 Bdellovibrio bacteriovorus
7_pfamImport 153 SLSVTEGQIYLELNGTNLETQI 174
WP_013807158 153 TLSITERELYLDLNGSVLSTav 174 Hoyosella subflava
WP_014983733 153 TLSVTERALYLDLNGTGCSTSV 174 Nocardia brasiliensis
Q5Z0L2       153 TLSVTERRLYLDVNGSGFETAV 174 Nocardia farcinica
Q39UW7       152 SVTITEGTVYLEVDGVTHETgi 173 Geobacter metallireducens GS-15
WP_011734489 152 SVTITEGTIYLTVGDTTLESAI 173 Pelobacter propionicus
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