Conserved Protein Domain Family
VDE

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pfam07137: VDE 
VDE lipocalin domain
This family represents a conserved region approximately 150 residues long within plant violaxanthin de-epoxidase (VDE). In higher plants, violaxanthin de-epoxidase forms part of a conserved system that dissipates excess energy as heat in the light-harvesting complexes of photosystem II (PSII), thus protecting them from photo-inhibitory damage.
Statistics
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PSSM-Id: 488783
Aligned: 23 rows
Threshold Bit Score: 239.937
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002294821 168 DKDC-----LVNQ---CQVQAKACLQDDpDCRKGLTCTAKCL---GDNACITGCFARY----GNENLDELLKCTIEDHEC 232
XP_002180635 135 DVGC-----FINK---CGDQTKALFSNP-RGIKGVSCLGRCK---GEQSCATRCFAEF----GSESLNAWLSCTIEENEC 198
CBJ31191      47 DVGC-----FANE---CKRETASCFTDG-SCLKGVTCLGRCK---GEQECATRCFAQY----GSNKLDSWLTCTLEDHSC 110
XP_005764800 114 DPQC-----FAKS---CKLQTKACAENG-DCMKGLTCAAKCM---GDTQCTVGCFAKF----GNPVLDDVLSCTIEDQSC 177
XP_002180051 141 DQNC-----LVSA---CSLQTKACLQDDpSCRKGLTCTAKCL---GDNACITGCMARY----GNANLDNLLKCTIEDHEC 205
CEL92120     188 DPLC-----FVRR---CQLQTKACAADR-SCMKGLTCLARCR---GDSMCSTSCFSRF----GSSTLDAFLTCSVEKEGC 251
XP_005831564 118 NGPC-----FADEktgCGKSFKECAENK-DCQKGLSCLARCK---GEPTCSTGCFAAF----ADDSMTNFLGCALEDKEC 184
XP_005790583  23 QSAC-----VVEH---CGAQLARCLADT-ACRGWSLCNAGCGlgtEALACNQRCADLHtplrGSPAIDAFSICTISDHHC 93 
CEM35152      27 TRSSvdyygLLTK---CGGPLLRAMSDR-RGLHEFVCLMKCGm--DDIACQMRCGDLY----EEDVLKEFHICAISEHQV 96 
XP_005783689  52 IGSC-----LIQK---APGALARCVTDP-TCLANLACIQTCTnrpDEATCQIACGDKF----ANGVTEAFTKAAVTEQKC 118
XP_002294821 233 IKvaile-----------------gggdvLGREPKSPAPTVQGFDLASMEGTWYK---------------VAGYNPNYDC 280
XP_002180635 199 VKvpk---------------------nvdNSAEDIGYSTTLRSFDPQSLVGTWYK---------------TDGLNPNYDL 242
CBJ31191     111 VKipk---------------------dmdFSAIDKDPPHIVKGFEAKQLQGTWYK---------------IMGVNKKYDC 154
XP_005764800 178 LKiaiva------------------pgadGPLDAPLPPKPLVAVTPQQMAGKWYK---------------VMGWNSNYDC 224
XP_002180051 206 IKvaile-----------------ggadvFGQEPRAPAPTVTAFDPKSLQGSWFK---------------VVGYNPNYDC 253
CEL92120     252 VNvprdlgp--------------atwtspKEDQAPGP---VDDFDVASMEGTWYK---------------VLGMNSRYDC 299
XP_005831564 185 INfpkdpkl--------------lgwlddGAA---AP-KKVANFDINSLKGDWIKkkwdgrecdghlllqVLGLDDRYDC 246
XP_005790583  94 VPqrr--------------------------qrCAVPRNTLPALELAAFEGDWWV---------------TRGLNPIFDC 132
CEM35152      97 IPqridrhaaegrvrddqgkseqvarqlpGASEVDRRIPVVAALEPAALQGEWWV---------------VYGLNPVFDC 161
XP_005783689 119 VPqrq----------------------ddGSWPVPADSTLVTKFSASDLDGDWYI---------------SAGLNKAFDI 161
XP_002294821 281 YACQRNTFsspegglsdslqlptggilgslsnavGSiGADR--------------LQV--------------DVEFSMPR 332
XP_002180635 243 FDCQKNTF--------------------------TPtSDKE--------------LDM--------------GIFFRVQR 268
CBJ31191     155 FDCQKNTFnvaqavdapv-------paggdvtaaTAtPRQV--------------ADI--------------KVNFRLAK 199
XP_005764800 225 YDCQRNSF--------------------------RPaARQQamaia----adgsaVDV--------------DVEYSLPR 260
XP_002180051 254 YACQRNTFsapdssangnrn---nllwsvasgntNPaVTNQ--------------LRM--------------DVEFSMPH 302
CEL92120     300 FDCQKNTFt------------------------pAEePNKP--------------WRV--------------AVEFSLPR 327
XP_005831564 247 FECQQNRFr---------------------------eENGQ--------------WRM--------------DTTFRLPR 271
XP_005790583 133 FDCQRHTFsl-----------------------gAAgEPKR--------------LHG--------------ALRYSVKR 161
CEM35152     162 FPCQHHTAsv-----------------------vKS-APGKtseavrsddgaphpIMRwkngawtaangvrfDISYRVPV 217
XP_005783689 162 FDCQLHRFs-------------------------AP-APDL--------------LVG--------------NLQWRIKD 187
XP_002294821 333 ylpdgspqppsgvresfissadsmegsglqSVG----YNQYSTHETMVFDtvksngvgeavkl------algkrgeekly 402
XP_002180635 269 pp--------------------------esGGG----YWENALTEHMIVDvpvqpptagtqlvasanaatgdlndelnpt 318
CBJ31191     200 p----------------------------dSDD----FWENTITETLQVDpad--------------------------s 221
XP_005764800 261 qrag------------------------------mpqDFHAQLHEKLVFDttpg-------------------------s 285
XP_002180051 303 llpdgsppppsnvresilvsgedgsvfgskSIA----LNDYRTRETMVFDqvstgnnmvfh----------kgttqevsy 368
CEL92120     328 p-----------------------------RGG----AWNNRVSEDMFPEatpdm-----------------------rk 351
XP_005831564 272 arg------------------------mskDSN----YLQNDLTEEVFVDskd--------------------------a 297
XP_005790583 162 dl--------------------------hcSFPqrceYVRREVNQSFAQS------------------------------ 185
CEM35152     218 p-----------------------------HGGdkqpFFTRHVEQVFFPH------------------------------ 238
XP_005783689 188 pv---------------------------aGTN----FVTRYTVQTFKQD------------------------------ 206
XP_002294821 403 srTaHSEGEMFG-------LKFWENWYIIG-----QNNPGQDEFKFVYYNGKT-RQNTYDGAFIYSRSRTLSPASMEKVY 469
XP_002180635 319 grTmHTAGKMYG-------LEFTENWYILGe---sDGKGSVPPFKLVAYKGHT-LQGNYEGAFVYAKEATVPEAAKPAIR 387
CBJ31191     222 prTfHTDGKLFG-------LSFKENWYVTG-----HSTDPGEEFVFVQYRGHT-LQGSYDGGFVYARKPYLPKSALAKVA 288
XP_005764800 286 hrTaHTEGKMFG-------LTFWENWYVIG-----ANDRGEDAFRIVYYTGKT-LQNKYEGAFVYARKPDLPASAMPHIY 352
XP_002180051 369 srTaHSEGEMFG-------LKFWENWYIIG-----ENDPGQPEFKFVYYNGKT-RQNTYEGAFVYSRSKELAPESMAKVY 435
CEL92120     352 qrSyRTKGEMFG-------LTFWENWYIIG-----QRDEGPDPYKFVYYTGHT-LQGNYRGAFVYVRTPTLPQSIVPELT 418
XP_005831564 298 rpSmHTTGKTFG-------LTFWENYYIVGq-----GKD----WQFVRYVGHT-LQGGYKGAFVLSRTPELSASALEEVK 360
XP_005790583 186 ----NATGHLANhgnppaqLHYADDWYVIAh--------rPETYILVYYCGCNdADCGYSGAVLYTRSRSGALDAADKAA 253
CEM35152     239 --R-SSPGVLRShdp--tyLHQSDDWYILS--------ADPERYFIVYYMGCNdAWCGYDGGVVYSRTPEPSQATIDDVR 305
XP_005783689 207 --A-SRPGVLYNhdn--efLHYQDDWYVLAnrrayDDAKGKGGYVVVYYRGSNdAWDGYGGAVIYTREPKLRQEYVPEIS 281
XP_002294821 470 KIA-----KDAGMNPDQFCKIQN 487
XP_002180635 388 EAA-----TKAGLDFDAFTRIDN 405
CBJ31191     289 RVA-----REHGIDPGSMLAIDN 306
XP_005764800 353 SIA-----RQAGLEPTSFCAIDN 370
XP_002180051 436 SIA-----KEAGMKVDQFCRIRN 453
CEL92120     419 QVA-----ERAKLKLADFCVIDN 436
XP_005831564 361 AVA-----TEQGLDLSGFCRIKN 378
XP_005790583 254 VAAaaraaGVDGFELSALCTPDN 276
CEM35152     306 EAL-----RCAGLSIVSMCPVDN 323
XP_005783689 282 AAL-----DKVGLRWADFTETDN 299
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