3QQZ


Conserved Protein Domain Family
SdiA-regulated

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pfam06977: SdiA-regulated 
SdiA-regulated
This family represents a conserved region approximately within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators. Some family members contain the pfam01436 repeat.
Statistics
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PSSM-Id: 399752
View PSSM: pfam06977
Aligned: 20 rows
Threshold Bit Score: 286.084
Threshold Setting Gi: 122399446
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3QQZ_A              5 NHAASFQNYHATIDg-kEIAGITNN-ISSLTWSAQSNTLFSTINK-PAAIVEXTTNGDLIRTIPLDF-VKDLETIEYIGD 80 
Q1GYJ4             25 NLSGYTLGYQFRLP---GQPGMAAE-TSAITYNWDTGTLFVVGDE-AEAIVEVSKSGEVIGSMKLSG-FDDTEALTYIGN 98  Methylobac...
mgcchina:PST_0401  72 AAGIWLPDYELALEt--TLAGLEDDeTSGLTWSPLTGTLFTVTGK-HPQLIEFTPAGVVLRRIALTG-FSDPEAVEALDD 147 Pseudomona...
jgi:Pmen_4229      63 LASVWLPGYRAVIQa-rALPGLEKDeTSGLTYNPVTGTLFAVTGK-NPLLVELSREGEILRRIELIG-FADPEGVEVLGD 139 Pseudomona...
WP_011912170       57 RRSLWLPEYRARIDa-lPVATVKDN-LSGLTYDERRGHLWAVVNN-PEELLALGRDGTFIARYPLQG-FEDVEGVTYLGD 132 Pseudomona...
mgcchina:PST_0912 126 PALRWLPGYRVAIDa-rPIEGISRN-LSAITYDSDLDRLLGVINGgPTEIVALSKRGELLERYPLEG-FGDIEGLTYMGG 202 Pseudomona...
Q93GS3             47 pESWYPQETEWHLTaekEITGIHGG-LSGLTWNPDSRTLFAVTDH-PSSVVELDTEGNVLRVIPSDG-DHDFEAIEYLGG 123 Salmonella...
Q8ZKD2             53 psALALSSYKAVIQq-kPVAGVKSN-LSGLTYSAEDRMLFAVINN-PPELVWLTTEGQLVGRMPLQG-IHDPESIAWSGG 128 Salmonella...
WP_012132255       26 ADNQTEPAFGYTLDfkkPLSGIDN--LSSLSYVPEEDVFVATLNR-PATILKLSKNGEILARKSIADrIKDAESIEYAGN 102 Citrobacte...
P39382             36 nHAASFQNYHATIDg-kEIAGITNN-ISSLTWSAQSNTLFSTINK-PAAIVEMTTNGDFIRTIPLDF-VKDLETIEYIGD 111 Escherichi...
3QQZ_A             81 NQFVISDERDYAIYVISL---TPNSEVKILKKIKIPLQe-SpTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL--- 153
Q1GYJ4             99 GQFALGEERTQSLFKVTYeadTTLRRANALPAYSFGPY--S-NNEGLEGVSWDPRNNSFIAVKEKNPQAIYEANIDFndg 175 Methylobac...
mgcchina:PST_0401 148 GRLAIVDERRRLVAVFRLkpgVESLELDDLASYDLGFAe-A-GNKGFEGLAWNPHTQRLLLAKERDPQGLFELPF----- 220 Pseudomona...
jgi:Pmen_4229     140 GRLAIIDERRRQLTTITLrdhDLSLDAADFPGFDLGFAd-A-GNKGFEAIAWDARSRSLMLGKERGPMGLFSLPF----- 212 Pseudomona...
WP_011912170      133 DLLVLTEERQQALVVVQVpnlAGPLRRADARSITLALNe-A-DNTGFEGVGYDRAGDRLFVVKEHSPRKLYEIHGIKrs- 209 Pseudomona...
mgcchina:PST_0912 203 GRVAVSDERAQRISIFQLptlARSINVSEARFFSLGIGl-N-GNKGFEGVTYDAVGDRLFIVKERDPRQLYEVRGVAas- 279 Pseudomona...
Q93GS3            124 NRYALSRERERTLTTHCIdssTTVLPPAT-YSLTLDVNrhS-DNAGFEGLARGRGEHALMVAQEKKPLRLYVTDR----- 196 Salmonella...
Q8ZKD2            129 NQFQIGSEKDGAVYKTQVdiqRGTMQIISMVKLE-GYDk-A-KNKGLEGTAWDAKNERLYAAKERKPIMIKEVEM----- 200 Salmonella...
WP_012132255      103 GTYLLVDEADSAMYVYQL---SQDLDIRSVRKIETDLFenA-RNRGIEGIAWMAGRNELYFAKERKPVMLYRTQS----- 173 Citrobacte...
P39382            112 NQFVISDERDYAIYVISL---TPNSEVKILKKIKIPLQdsP-TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLL--- 184 Escherichi...
3QQZ_A            154 --SSNELHISKDKALQ---RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEXSLTKGSRGlshnikqAEG 228
Q1GYJ4            176 tgSHDILFDAALLGVLdlsDVQVLATVPSFLGTGLDDNLLVISQESRLLMEVTRTGEILGSINLRYLSGA-------AEG 248 Methylobac...
mgcchina:PST_0401 221 --PGEDGAVGALKALPs--QPLLVRDLSSVTIDPRSGHTLLLSDESRLLVELDLQGKPRSFIALFGGLNGlvqgieqAEG 296 Pseudomona...
jgi:Pmen_4229     213 --PGEDGAAGVMQPFSy--GDLGMRDISSLSIDARTGHALVLSDESRMLLEIDRAGQPVSFLSLSAGRNGlaksikqAEG 288 Pseudomona...
WP_011912170      210 laGDMDIKIIDRQAWId--KLDMASDLSSVHFDEQTGHLVLLSDEAKMMLELDAEGELVSFRSLWRGFAGlersvpqAEG 287 Pseudomona...
mgcchina:PST_0912 280 ldGQLQLAVHDRSDWIa--SQVFATDLSDIHFDAETGHLILLSDESRLVMELGADGRMLSYRSLNGLFSDlgrsarqPEG 357 Pseudomona...
Q93GS3            197 --SPDALSVSDSLTHRa-sLPWFLKDISGLHYDRNNGLLYVLSHESAVVVVSGLDGG-RKVMSLHRGLCGlrsdipqAEG 272 Salmonella...
Q8ZKD2            201 --SKNGITRALPSAIT-----ASVSDVSGLEYHAPTDSLLVLSDESKMILEVSSEWRVRDRLFLTAEWSGlrddipqPEG 273 Salmonella...
WP_012132255      174 --DGGLTHFSEIVPLDdliKNLDVDDISALHIHGE--HLLILSDESRSLTEIDLNGNVLRRMSLTQGENGleedipqPEG 249 Citrobacte...
P39382            185 --SSNELHISKDEALQ---RQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGEVIGEMSLTKGSRGlshnikqAEG 259 Escherichi...
3QQZ_A            229 VAXDASGNIYIVSE-PNRFYRFT 250
Q1GYJ4            249 VTIDENGIIYVSQEqPSVFVFLP 271 Methylobacillus flagellatus KT
mgcchina:PST_0401 297 VAMDGEGNIYVVGE-PNRFYVFS 318 Pseudomonas stutzeri A1501
jgi:Pmen_4229     289 VTMDEEGNIYIVAE-PNLFYVFS 310 Pseudomonas mendocina ymp
WP_011912170      288 MTFDAQGNLYLVSE-PNLFYAFE 309 Pseudomonas stutzeri
mgcchina:PST_0912 358 VTLDNDGTLYVVSE-PNLFYSFR 379 Pseudomonas stutzeri A1501
Q93GS3            273 ITSDDRDTLWIVSE-PNLFYRFT 294 Salmonella enterica subsp. enterica serovar Typhimurium
Q8ZKD2            274 IAMDNENNLYIVSE-PNLFYKFS 295 Salmonella enterica subsp. enterica serovar Typhimurium
WP_012132255      250 VSMDKAGNIYIMSE-PNLFYRFE 271 Citrobacter koseri
P39382            260 VAMDASGNIYIVSE-PNRFYRFT 281 Escherichia coli K-12
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