2VRQ,3S2C


Conserved Protein Domain Family
Alpha-L-AF_C

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pfam06964: Alpha-L-AF_C (This model is not part of the current CDD release)
Alpha-L-arabinofuranosidase C-terminal domain
This family represents the C-terminus (approximately 200 residues) of bacterial and eukaryotic alpha-L-arabinofuranosidase (EC:3.2.1.55). This catalyzes the hydrolyzis of nonreducing terminal alpha-L-arabinofuranosidic linkages in L-arabinose-containing polysaccharides.
Statistics
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PSSM-Id: 517493
Aligned: 202 rows
Threshold Bit Score: 88.3811
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2VRQ_A       297 DEWGT---------Wydvepgt------npgflyqQN-SIRDALVAGATLHI-FHRHCDRVRMANIAQLVNVLQ------ 353 Thermobacillus ...
Q8G579       558 GEYSA---------Ngyfagq--------pqteqgAN-TWKSALGEAAFLTG-CERNSDVVRMTSYAPLLAHIPakgwaq 618 Bifidobacterium...
ESK92254     478 GEYAVistv-dsdiWnn----------------rlPYpVIQGAVSEAAYMTG-IERNSDIVFAACYAPLLNHVSgtqwsp 539
XP_001840409 413 GEYAA---------Istnpndlf----gspangrlVYpTMQSAAGEAAFMTG-LERNSDIVFAAAYAPLIGHAT------ 472
XP_007777373 448 GEYAV---------Iddaag-----------erleYP-NMQAAVAESVYAIG-MERNSDVVKMAAYAPLLQHLNdyq-wt 504
EOD51707     509 GEYSV---------YqvdtpdgvvnfsnpsdihvyYP-RMISAIAEGIYALG-AERNPNTVKLNSYAPSLQNRNwyn-wt 576
XP_007293946 514 GEYSV---------Ysidtpsgevd-wsnppdekiMYpRMVSAVSEGVYLLG-AERNPNVVKMSTYAPTLQNWNwyn-wt 581
XP_003712124 442 GEYGVarangnevlWkdh--------------larPW--WIASVAEAVFWIG-NERHPDKIYGSAFAPLLQHVDqyq-ws 503
XP_007929706 455 GEFAV---------VepdgynrsdvtwedgapragAP-FWDGSVAEAIFLLGaVERNADKIIGAAYAPMFQNLNhwq-wi 523
XP_003853287 426 GEYAI---------VeydgfnrtevtwekgaprafTP-FWYGTVAEAIFVLG-AERNSDKMIGAAYAPMLQNLNrwe-wi 493
2VRQ_A       354 SVILT---EGERMLLTPTYHVFNMFKVHQDAELLDTWESVERTGPEGElPKVSVSASR-AaDG---KIHIS-LCNLdFET 425 Thermobacillus ...
Q8G579       619 NLIEF---NPAHVNPTVNYEVERLFSTHLGDTTYAVSIE--QTASRPA-KHLYVSATGhDrDDacrYIKIVnISDSpVDV 692 Bifidobacterium...
ESK92254     540 NLVAY---DAMNVVKSASYYVQKLFGNNRGDQYISSTLPARs-------GALQWSVVKsG-SN---NIIIK-IANTgTSA 604
XP_001840409 473 --------RNQ-----------WFFSVYRGDEYLPSTLP----SRTG--TQFWSVVRKkS-TR---EIIIK-TVNVaPSA 522
XP_007777373 505 PNLISfnnDPDGLVLSTSYYVQQMFSVNRGHTILPVTAD-Sa------fGPLYWVASKsD------DGYLI-KMSNyGGA 570
EOD51707     577 PDMISyeaDPSKTVLSTSYWQQLLFAHYRGTQTLPVVNTQGd------fNPLYWQSSIeD-NG---SLYLK-VV-NaGNR 644
XP_007293946 582 PNLIAfdaDPSHTVLSTSYYLQKLFNAYRGTESVEVSNS---VGDFG--PLYWASSMEeG------KVFLK-VINInSTV 649
XP_003712124 504 PNLISfnaNTSATTLSTSYHVIKLFSNARFTEVLPVDNSAEy------nPAFWVAGKNaHaNK---FLWKAaVYNVtGDA 574
XP_007929706 524 PDLISfdaDPKHTTLSTSWHVIKLLSGVRMTEILPMD--GAv------yDPMYYVGGRsKgRK---SWVLK-AAVYnATE 591
XP_003853287 494 PNLISydaNPAHTTLSTSYHMISLFSSNRITENLPMEGA--EFG-----PAYYVAGRSnV-TG---SHILK-AAVYnSTG 561
2VRQ_A       426 -GASVDIELRGLnGGVSA----TGTTL-TsG--RIDGHN-TFDEPERVKP--APFRD----FKLE-Gg--hL-NASLPPM 486 Thermobacillus ...
Q8G579       693 -TLEIARGLAGLgASPSRpvrlEVTTLsA-NptAKTTIGyRGEASGAIVP---ERRA----YTLP-Sps-sLlAMKIKPY 761 Bifidobacterium...
ESK92254     605 qTLAFALPWSNV--ASSA----SVDVLsA----NSGASN-TPSNPNSIQP--TTKTI-----TVGqN----F-SYDVPGL 661
XP_001840409 523 gQFTFVLPFNNV--ASTG----TAYIL-S-G--GGTSSN-TPSNPNAIVPrtVTIPT---------Gk--rF-DFTAPGV 579
XP_007777373 571 -SHDISVAFPQp-CSGIL------TML-T-G--DQNAQN--TNLTTSVTP--TISDI----MSADg----nL-HFIMPGW 625
EOD51707     645 -TIPLSVSIDa--AYSKV----NGTIM-Q-Nd-DINGFN-YVNNQTAIIP--RPLGAngtaVPAK-SsngsF-IWNVPIH 709
XP_007293946 650 vPLTVDLEt----RWTSV----NGTIMsN-A--DPNGFN-YKDNATAITP--LPLNL----TSLApGkd-gSwTWNVPAY 710
XP_003712124 575 gEVDFDVVFPGAvEGSSA----QLTVLtS-S--DPLNEN-LLGEADVVVT--ETRNV-------TaGqn-gF-TFKLPQW 635
XP_007929706 592 -NVPFAVKFEGMeVAGRMg---DLTWL-T----APFNSS-QPLGGNVVET--HVEGI----VSGE-Gg--gF-EFSLPPY 651
XP_003853287 562 -DVPFNVVFEGVgAGSTA----TLTYL-T----APMNAS-QPIGGNIVET--HTSQV-----DAD-Ang-aF-CFSLPEY 620
2VRQ_A       487 S 487 Thermobacillus xylanilyticus
Q8G579       762 S 762 Bifidobacterium longum
ESK92254     662 S 662
XP_001840409 580 S 580
XP_007777373 626 S 626
EOD51707     710 S 710
XP_007293946 711 S 711
XP_003712124 636 S 636
XP_007929706 652 S 652
XP_003853287 621 S 621
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