5ZNM,1JCH


Conserved Protein Domain Family
Pyocin_S

?
pfam06958: Pyocin_S 
Click on image for an interactive view with Cn3D
S-type Pyocin
This family represents a conserved region approximately 180 residues long within bacterial S-type pyocins. Pyocins are polypeptide toxins produced by, and active against, bacteria. S-type pyocins cause cell death by DNA breakdown due to endonuclease activity.
Statistics
?
PSSM-Id: 399737
Aligned: 36 rows
Threshold Bit Score: 78.5646
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
5ZNM_A              141 V--IEPGATSVNLPVRGQL-INSNGQL--ALDLLKT-GNESIPAAVPVLNAVRDTATGLDKitlPAVVGAPSRTILVNPV 214  Escheri...
wugsc:SARI_02603    912 LrqKSLTGAKATTRVRFFWrQDEQGNM--RVYGVHT-GEGTPYEGVRTAEMKWVEKNSRYEf--KPAHGADVPLITWTPE 986 
Q2C918              172 TeeELRQMREVKSRIRVQIiDPDDDDVypTVRAFHV---GDGHDRIQVRYVDKNAKGQYSV-----ILEEGGPTIYWSPD 243  Photoba...
wugsc:VIBHAR_00543  589 TdqDLRQVTTAQSRVRVHItEPQDGEFypHVQGYHV-----DDTRIPIKYVKQGNNGQLSV-----AIEDNGPTIYWTPE 658 
WP_000366553        565 GnsDFAANDTTTMRVRFNMyTDENGKQ--QVLGIKTgEGSVYGERVAKREA--VRQGQHFV-----AELENGITITWTPD 635  Vibrio ...
jgi:Maqu_0032       259 TeeELREMTEAAIRVRFHLhVDATGNL--RVAGYHVnDSTGYKDRVPVAHA--ELKGENFE-----VVVDDDFTLVWYPD 329 
WP_015885784        156 SeeQLRSMQRARSQMRLHIeQREDGTL--KGYGFYT-GNHADWQMIDVVQ--FQSRGDQFV-----ADLDEGVELIWTPA 225  fluores...
Q3KGY0              174 TedQLLALKQARTRVRLRVeQQADGNL--KGYGFYT-GKNRDWEMVDVVQ--FAARGNRFV-----ADLGEGVELVWTPA 243  Pseudom...
Q3K6V8              148 TdeQLRSMSRATTRVRFQFrRDAEGVM--QVYGIHT--GASGDDSVRTVKVEWNNDKSAME------AKLNDITILWTPQ 217  Pseudom...
EEQ09147            173 PkeTLKTVDEVAVNVRISD-VTQEGVQ--QAVLIKN---PTVTQRVPVVKAVPTATPNVYT--------------APVPG 232 
5ZNM_A              215 pq--pSVPTDTGNHQPVPVTPVHTGTEVKSVEMPv--TTITPVSdVGGLRD---FIYWRPdaAGTGVEAVYVM 280  Escherichia coli
wugsc:SARI_02603    987 rpeggDLPAHTGSDIKPIDQATILVTPIPDGKDEy-tTPPFPMPeERDLND---YILVFP--AGSGIKPVYVY 1053
Q2C918              244 et-gnQVPYTTPSQNDGVSFGDIWVNPLSDAVSNs--STVLPMPaESDWQD---RILVFP--EDSGVEPLYLV 308  Photobacterium...
wugsc:VIBHAR_00543  659 en-geASWQTTPDHSDDFEKEDILVTPIHSDGDAn--VTVTPAPeEKDWRD---AILVFP--ESSGIAPLYVV 723 
WP_000366553        636 gstdvLTPDTVLPENDQLDVHNIWVRPIEEHEQEi-gTALYP---EEELAE---YIVTFP--ADSGVSPLYLV 699  Vibrio cholerae
jgi:Maqu_0032       330 dsghrPVVSTEYPADSGIDPYSILVTPIQEDG-----QEHSPPGyQQPFEDqveLIVSFP--ADSGIEPLYLV 395 
WP_015885784        226 ad--pSDTLGIPALEAAPQAPVIWIYPPTEKAAQilvNPIYP----PEYRD---FILVFP--AESGVRPLYVV 287  fluorescent ps...
Q3KGY0              244 vd--gSDILGIPALEAAPQAPHIWVYPPTKAADGilvNPVYP----PEYWD---FILVFP--AESGVRPLYIV 305  Pseudomonas fl...
Q3K6V8              218 rg-plGSMPPLVHPEHGEALSTILVHPIAANTDSq--IEILPGe-DITAED---CILVFP--AETGLKSLYVV 281  Pseudomonas fl...
EEQ09147            233 vt-piHINVVESIEPSHQTQPTVAGKPTATPVENa-pIKAVTSPsGRHTHD---AIIVFP--ETSGIEPLYIS 298 
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap