Conserved Protein Domain Family
zf-LSD1

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pfam06943: zf-LSD1 (This model is not part of the current CDD release)
LSD1 zinc finger
This family consists of several plant specific LSD1 zinc finger domains. Arabidopsis lsd1 mutants are hyper-responsive to cell death initiators and fail to limit the extent of cell death. Superoxide is a necessary and sufficient signal for cell death propagation. LSD1 monitors a superoxide-dependent signal and negatively regulates a plant cell death pathway. LSD1 protein contains three zinc finger domains, defined by CxxCxRxxLMYxxGASxVxCxxC. It has been suggested that LSD1 defines a zinc finger protein subclass and that LSD1 regulates transcription, via either repression of a pro-death pathway or activation of an anti-death pathway, in response to signals emanating from cells undergoing pathogen-induced hypersensitive cell death.
Statistics
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PSSM-Id: 517482
Aligned: 71 rows
Threshold Bit Score: 29.3363
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_018512616   59 CGGCRTMLMYTRGASSVRCSCCQTV 83 
PNT10607        5 CSNCSSPLQLPPGANSICCSICHAt 29 
EEF35879        7 CSHCWTPLQLPPGARSIRCSICRAV 31 
XP_002280421    7 CSNCRIPLQLPPGARAIRCSVCHAV 31 
XP_020873511    7 CSSCRTPLHLPPGATRIRCAICHAf 31 
XP_006375191    9 CSKCQTPLQLPPGAESIRCVICQAV 33 
XP_004235205    7 CSKCHTPLQLPPGAKSIRCAICRAI 31 
19_pfamImport   1 CAHCRTPLQLPAGARSIRCAICQG- 24 
XP_006365337    7 CTNCHTTLQLPSGAQSIRCAICCat 31 
7_pfamImport    1 CVGCDVVMRFPADATHVRCAMCDAV 25 
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