Conserved Protein Domain Family
DUF1242

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pfam06842: DUF1242 
Protein of unknown function (DUF1242)
This family consists of a number of eukaryotic proteins of around 72 residues in length. The function of this family is unknown.
Statistics
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PSSM-Id: 399673
View PSSM: pfam06842
Aligned: 87 rows
Threshold Bit Score: 33.2316
Threshold Setting Gi: 122106343
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002997256  10 LLTVILLFICTCTYIKMK--FPTLFDRGqlpgKhEGLGGLCW 49  Phytophthora infestans T30-4
Q38BI6        10 aaYVLLLIICTATYLRQY--SPTLFHRD----HtELHRKFLY 45  Trypanosoma brucei
A0DYL6        14 MIVILLLVICTSTYIRQM--KPDLINSH----R-HGFRGFFR 48  Paramecium tetraurelia
EGR31707      10 LITVLLFIICTCSYIRRS--KPEYINPY----T-QGFRGFFR 44  Ichthyophthirius multifiliis
PDM62965      40 LIVVALLLICSCAYLKRIprINQLLLSE----K-KGFFGIGy 76  Pristionchus pacificus
Q8WQE6         9 LVVAALLFICTCAYLKRVprVSSWLLSE----K-KGFFGVFY 45  Caenorhabditis elegans
Q28GL2        10 LLVFALLFVCTCAYFRKVprLRSWLLSE----K-KGVWGVFY 46  tropical clawed frog
XP_001641877   7 LLAFALLIICTCAYIRKVprLKSFFLSE----K-KGFFGVFY 43  starlet sea anemone
XP_004998283  10 MVVFVLLMICTCAYIKRVprLKDFFLSE----K-QGFFGVLY 46  Salpingoeca rosetta
XP_002597362   9 LLVFALLVICTCAYMKRVpkLKQWFLSE----K-KGALGVFY 45  Florida lancelet
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