5D0O


Conserved Protein Domain Family
Lipoprotein_18

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pfam06804: Lipoprotein_18 
NlpB/DapX lipoprotein
This family consists of a number of bacterial lipoproteins often known as NlpB or DapX. This lipoprotein is detected in outer membrane vesicles in Escherichia coli and appears to be nonessential.
Statistics
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PSSM-Id: 399648
Aligned: 44 rows
Threshold Bit Score: 219.061
Threshold Setting Gi: 123278796
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5D0O_C         47 LAELHAPAGMILPVTSGDYAIPVT---NGSGAVGKALDIRP-----PAQPLALVSGARTQFTGDTASLLVENGr------ 112
Q21WN3         35 GTSLEVPPDLTQLSRETRYAVPGG------AVSASSFQLGQvtqtvPTATTSLGD-VHIERSGNQRWLVINRPa------ 101 Rhodoferax fer...
E1SLW4         41 PTPLVVPAGLDAPRLSREFDIPKLgdnAERDVVGPRLDVRP-----PLQVLPLAPGTRIQDGVDSITVLVESNqddidla 115 Ferrimonas bal...
jgi:Sama_1907  26 TAPLKVPEGLKSPNYSREYDIPTLgakANRELVGKNLDIRP-----PLQVLPMAEGTRVEEGSDNVKVIVESFdnsldlk 100 Shewanella ama...
BAJ01889       38 QPVLTIPAGLNTPVYSKEYKIPKLnskASASLIGKQLDIRP-----PLQILPMAEGTRVEEGSDNIKIVVDSIdkdielk 112 Shewanella vio...
WP_011865647   38 QPKLVIPAGLNQPKYNTEFDIPEVgskVDKTLVGKKLDIRP-----PLQVLPMAEGTHVEESSDSIKIVVESIdndidlr 112 Shewanella loi...
Q8EFT6         38 APMLKIPEGLKTPPYNKEYDVPALgpkANPALVGKNLDIRP-----PLQVLPMAEGTHVEEGSDNIKIVVESIdnnvdlk 112 Shewanella one...
Q082V2         38 TPLLTIPQGLNTPTYSKEYDIPVVgnnVNKQLVGKNLDIRA-----PLQVLPMAEGTHIEESSDSIRVVIESIesttdlk 112 Shewanella fri...
Q12NF6         44 TPGLNIPASLTTPPYTKEYEIPPVgtkANTAIVGKKLDIRA-----PLQVLPMAEGTRVEENSDNIRVVIESIdnsmdlq 118 Shewanella den...
WP_007637233   45 GQKIKIPDDVDSPNFNDAYKLPALgedAPQTATGKKLSVFS-----PSLVLPVVAGSHIEEGSKDAIVWFDQVddslpld 119 Paraglaciecola...
5D0O_C        113 GnTLWPQVVSVLQAKNYTITQRDDAGQTLTTDWVq--------------WNRLDEDEq--yRGRYQ--ISVKPQGyQQAV 174
Q21WN3        102 D-KLWEPVRDFWQENGFLLAIDQANLGIMETDWAenrakipqdfirntlGKVIDSLYstgeRDKFRtrLERNASG-GTDV 179 Rhodoferax fer...
E1SLW4        116 Q-EIHDTLLKFLDDKSINVARDD--SGVIVTDWIeneev-------igksWFRDKVYq--iRQRYEfdTVVKDHGrSGSI 183 Ferrimonas bal...
jgi:Sama_1907 101 Q-EIFGLLKDHLQSRNIEIVKEDFASGTLETGWIetqev------lessLWGSDKVFn--lKQRYQyqVEVRPHGrTGAV 171 Shewanella ama...
BAJ01889      113 S-EMFNVIKDYLASRSIPILNEDYDKGLIETDWIenqev------idssFWGSDEIFk--lRQRYEfkINIRPHGrSGDL 183 Shewanella vio...
WP_011865647  113 S-ELFSILDEYFSQHEIKILKEDRDTGVIETDWIenqev------idssLWGSDEVYs--vRQRYRfsVNVRPHGrSGNL 183 Shewanella loi...
Q8EFT6        113 Q-EIFTNLDDFFAKQAIPIRSRDFDKGSIETDWIesrev------lessLWGSDKEYl--lRQRYRfdVETRPHGrTANI 183 Shewanella one...
Q082V2        113 Q-EIFDVINGYLNKNNIAVRSEDLTAGFIETDWIendei------iesnWWGSDKVYq--lRQRYRyqVDVKPHGrSGSV 183 Shewanella fri...
Q12NF6        119 Q-EIFDTIRGSLIDSGITVLVENTNEGFIETDWItseev------iesnWWSADKVYq--lRQRYRydIAIKPHGrTADV 189 Shewanella den...
WP_007637233  120 T-AIWNSLIRFLETEGIGVEMFDKDNQRLITDWVtldes-----kddkwYSWSNSERt--vGQRFEftLDKKPHGrTAGL 191 Paraglaciecola...
5D0O_C        175 TVKLLNLEQA------Gk--pVADAaSMQRYSTEMMNVISAGLDKSATDAANAAQNRASTTMDVQSa--------ADDTG 238
Q21WN3        180 FISHRGMIEVynssakDttvwQPRA-ADPELEAEFLRRLMVKLGVSQEQSKALLAAGASPSSSRA----------AAING 248 Rhodoferax fer...
E1SLW4        184 TIELVDHEEGld---gVddsiVLTDaDRRRYAIDMLNNAIAYMNFERQQRQATQELLNGRGIKTELg--------FDSDE 252 Ferrimonas bal...
jgi:Sama_1907 172 IINLVDHQESyd---gDdlktALSAdDKRRYAIDMLNNSIAYMAVKREQAIKAKRVRESLGIGVELv-------dGAEEG 241 Shewanella ama...
BAJ01889      184 MINLVDHEVSyd---gKqkdiVLSGeDKRRYTIDMLNNAVAYMSIKRSKSLKAKRLRESLGIDMSIvkgtsseveSEEGV 260 Shewanella vio...
WP_011865647  184 AIELIDHEESfd---gKaqdiLLTGeDKRRYTVDMLNNTIAYMSVKRAKAIKAKRLRESLGIDVALvkap-avaeNETPE 259 Shewanella loi...
Q8EFT6        184 VIHLVEHEEFyd---gKeqkvMLSGeDKQRYTIDMLNSAIAYMSVKREQTIQANRLKQTLGINVDLi--------TPEEG 252 Shewanella one...
Q082V2        184 SIDLVEHQEFyd---dKdqkiLLSGeDKRRYTTDMLNNAIAYMSIKRDQAIRAARIEQSLGIKVDLv--------TNATE 252 Shewanella fri...
Q12NF6        190 TINLIEHEEHyn---gEnqgvLLSGeDKRRYTIDRLNSSVAYMSAKREQLLKENRLRQSRGIDLQLi-------aAQGKE 259 Shewanella den...
WP_007637233  192 SVELVDYKEKl----tAqsteITQSkDKRRNEVDVLNRVVKNYEFETKVADVKRFRQIREGLQMDLg--------FDSDG 259 Paraglaciecola...
5D0O_C        239 LPMLVVRGPFNVVWQRLPAALEKVGMKVTDSTRSQGNMAVTYKpLSDSD------WQELGASD---PGLasgDYKLQVGD 309
Q21WN3        249 QPVVQIDDGFDRAWRRVGLSLDRTGFTVEDRDRAQGVYFVRYVaPTADKaepgflGKLFGASK---ADAaplKYRITVIS 325 Rhodoferax fer...
E1SLW4        253 NTAFVAEASFDQVWRRMDKVLPLLGFQVRDLDQQLATYFVDYe-PDGGF------WASLWGDNd-eLPLeegPYQIRLEP 324 Ferrimonas bal...
jgi:Sama_1907 242 DAFYLAQGDFNQVWGRLRLVLPEMGFEIADMDSSKGVYFLNYs-DNSGF------WSSLWGDAk--LELskgTYKLNVKD 312 Shewanella ama...
BAJ01889      261 ASYWLAEAPFKRTWDRLRIVLPELGFEIVDMDSNKGLYYINVt-DDSGF------WSSLWNDKd--LAInegSYRMTLED 331 Shewanella vio...
WP_011865647  260 QSFWLADASYSRTWDRLRIVLPELGFEIVDMDSNKGLYYINVs-DDSGF------WSSLWSDKk--LPMeegSYRLQIEQ 330 Shewanella loi...
Q8EFT6        253 AAYWSAKAAYKQVWDRLRIVLPEMGFEISDMDSAKGLYFIKFt-DNSGF------WSSLWNNNq--LSLkegSYRLLLED 323 Shewanella one...
Q082V2        253 SAYWLAEANYKSVWERLRLVLPEMGFDVVDTDNSKGLFYINLe-ESGGF------WSSLWSEEk--LSLkkgNYRLLLKE 323 Shewanella fri...
Q12NF6        260 GAYWLADGKFKQVWDRLRIVLPELGFDVLDMDMNKGLYYVNLe-ESGGF------WSSLWGDEs--LALdkgNYRVVLTA 330 Shewanella den...
WP_007637233  260 EPAFVVDADYDITWPRLLLVLRTLGFDVKDYDKSNGLLFVKYNgAEDGW------WSNIWSSDkneMNLdteEYRIKVAS 333 Paraglaciecola...
5D0O_C        310 LD---NRSSLQFIDPKGHTLTQSQNDALV 335
Q21WN3        326 QG---ASTTVSVLDAGGKPDTSANAQRIV 351 Rhodoferax ferrireducens T118
E1SLW4        325 MG---ERTAITLMDNEANPLPTETVTQMY 350 Ferrimonas balearica DSM 9799
jgi:Sama_1907 313 GEt-kGTSELHILDKEDSPLADEKVAQIY 340 Shewanella amazonensis SB2B
BAJ01889      332 DTn-aDKTRIYLRDSSDKPLDNEIVEAVY 359 Shewanella violacea DSS12
WP_011865647  331 DKgdtSKTRIYLKDKEDSPVSNEVVEAVY 359 Shewanella loihica
Q8EFT6        324 GDt-pDETKIWLRDAEDQPLSNDVVSKVY 351 Shewanella oneidensis MR-1
Q082V2        324 TDd-vNQTKILLHDVEDKPLSDESITEVY 351 Shewanella frigidimarina NCIMB 400
Q12NF6        331 SDd-tNKTNIYLKDVAGEPVDDEVMAQVF 358 Shewanella denitrificans OS217
WP_007637233  334 VG---QKTSITLLDDESKPFAVNKLTDLY 359 Paraglaciecola psychrophila
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