Conserved Protein Domain Family
DUF1216

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pfam06746: DUF1216 
Protein of unknown function (DUF1216)
This family represents a conserved region, within Arabidopsis thaliana proteins, of unknown function. Family members sometimes contain more than one copy.It has been reported that this domain will be found in other Brassicaceae.
Statistics
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PSSM-Id: 369060
View PSSM: pfam06746
Aligned: 12 rows
Threshold Bit Score: 96.786
Threshold Setting Gi: 1523413531
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q9LH98           1907 FFQKLKDYMKYLCPVSSTfeakDSRSYMSEMISMATKLSDAMAVLQA-KK-SGSGQMKTTLQGYQQEVMKTLTILQSVMG 1984 thale cress
Q9LH95            473 FFEKLKTSMSASAKLSTS----NAKELVTGMRSAASKIAEAMMFVSS-RF-SKSEETKTSMASCQQEVMQSLKELQDINS 546  thale cress
Q9LH98             66 FFEKLKDLLKLESSVTPLiednEPKTFKFDLKSKSENLLQTMFMLGR-------GLLSSSIRKEMFEVMKSLTELHAAIG 138  thale cress
NP_198803          73 FFEKLKAYSKYLCPVSKA------KGYKSDMKAKAGSLFEAMSALISvKHrSKEGSVNKSLQREKMEAMNTINLLQSVGE 146  thale cress
Q9LH93             73 FFEKLRAFAKYVCPIKRK----DQVDYDRDMKAKAGGLFQVISSFAI-------GKIKKEIQEDKMEVINTFKFMRFLAT 141  thale cress
Q9MBG7             73 FFEKLRGFAKYVCPIRRI----GQVDYDRDMKAKAGGIFKAISSFAI-------GKIREEIQEEKQEAIDTFRFMKSVAA 141  thale cress
XP_009115148      329 FFEKLKSTMAGSAKVASPk---KKGGLFSMIKGAVGKIGDAMQFIRS-RIgNKSAEVKKSMETYQTEVIKNMEELNAIYA 404  field mus...
Q9LH93            301 FFEQLKGTM-----IAPPk---ERKGLFSRIKSAAGKLSGAMGVMRS-RIgSKSAEVKKSMETYQEQVMKTLQELDTIHS 371  thale cress
JCVI:AT3G28830.1  400 FFESLKSSMQASASVGSK----TAKDYVSASKAATGKLSEAMASVSS-KN-VKSAKMKSNLDTSKDEMLKCVKQIQDING 473  thale cress
XP_013646137      441 FFEKLKASMTASSRVSSTk---SEQEYTNTAKSTTGKLSDAMTFVGS-RF-SKSAEMKSTIQTTQQQLIKNLQQFQNLNS 515  rape
XP_022552150      258 FFEKLKTSMSASTKISNT----DEKRFVSKMSSAVSSVSEAATTVTS-KL-AKSPEAKNRMESSQEKLMNTYKELEEVNS 331  rape
RQL87791          131 FFETLKSTMTATSKLAST----DEKTFVSGVKAATGTLSEAAETVTE-KL-GTSAESKQKIESSQQQLMKTFKELEDVKT 204  Brassica ...
Q9LH98           1985 KAVTeq--qSKdsgslTLTLSQQQAIKEIVLKWEQVMSQFVKIATESEKQFSleistengyhmkkSYNSSSSS 2055 thale cress
Q9LH95            547 QIVS-----GK-----TVTSTQQTELKQTITKWEQVTTQFVETAASSSSSSS-------------SSSSSSSS 596  thale cress
Q9LH98            139 RVIIek--hIKgdeamSLSLEQKNAVETSITQWEQTITRIVKIVVEVKSKSS-------------SEASSEES 196  thale cress
NP_198803         147 KIAGgrsnkTEtngvaKLTVEQQKEMKDGILKWLQVITRIVKTNVEINLKSS-------------SKSQTTQE 206  thale cress
Q9LH93            142 KIVGsr-kkEEseesmKLTAEQQKEIKEGILRWETIITRITNTMVSSTTNSA-------------SSNEESSV 200  thale cress
Q9MBG7            142 KIMGgr-kkEEneetmTLTAEQQKEIKEGILKWETIITRITNTMVSSTSTSA-------------SSSEESSV 200  thale cress
XP_009115148      405 KIVSqn--qSKkggamTCTPEQQAEIKTTITKWEQVTTQFVEVAIKSETSTT-------------TSTSTSTS 462  field mustard
Q9LH93            372 QIVSqn--qGKkegslTCTPAQQTQIKTTITKWEQVTTQFVETAIQSETKSS-------------STTSSSVG 429  thale cress
JCVI:AT3G28830.1  474 KMVS-----GK-----TVSSTQQSELKQTITKWEKVTTQFVETAASSSSSSS-------------SSSSSSSS 523  thale cress
XP_013646137      516 QIVGe----------qKVSSTKETEIKKTMSKIEQVTTQFVETAASSSSSSS-------------KQETAASQ 565  rape
XP_022552150      332 KIVSen--kGK-----TVSSAQKSELKQILSKWEQVTTQFVENLVSSSSSSS-------------SSSQSQQS 384  rape
RQL87791          205 KIVSes--kGK-----TVSSTQQTELKQTLTKWEQVTTQFVETAASSSSSSS-------------STQSQQIQ 257  Brassica cretica
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