Conserved Protein Domain Family
ABC_trans_CmpB

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pfam06541: ABC_trans_CmpB (This model is not part of the current CDD release)
Putative ABC-transporter type IV
CmpB is a family of membrane proteins that are likely to be part of a two-component type IV ABC-transporter system. Families can transport multiple drugs including ethidium and fluoroquinolones. Hungatella hathewayi CmpB is a member of TCDB family 3.A.1.121.4.
Statistics
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PSSM-Id: 517324
Aligned: 287 rows
Threshold Bit Score: 65.1712
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CDM67527       24 FNFIIYSFFGWILEEVYCYciekrfKEDGFLFgPFKpMYGIAMSILVYFAyilrlnwvmmIPLYVIVPSTVEYLSGYFLK 103
CDB99601      364 LIFFTFAMIGWLWEVLLFLftrgefINRGTSHgPWLpIYGVGGTVVLIVLkkfrnkpwltFLLSMVLCGVIEYFTSLILE 443
21_pfamImport   1 LLFFSFCITGWVWEVLLHIyydgqiINRGFTHgPWLpIYGVGGVIIITLLkrfrdrpvleFLVAFVLCGFIEYFTAWLLE 80 
WP_022355655  418 LMFFIFSCIGWLWEVSLHLitdgvfVNRGAMHgPWLpIYGSGGILILTLLkkfrdkpylcFILIFVLCGFLEYTTSYVME 497 Faecalitalea c...
WP_012740806  442 LIFFSLCFVGWIWEVTLHLisshtfVNRGVLHgPWLpIYGSGGILILICLkklrnkpvveFFASVVLCGFVEYFTSLYLE 521 Lachnospira el...
CCZ03809      431 FMFFIFSFLGWTWEVSIHLfkrgifINRGVLHgPWLpIYGSGGILILVLLyrlrkwpileFLATVLICGVVEYFTSYYLE 510
CDA90154      433 LMFFVFSFVGWLWEVSFHLyedgmiVNRGIMHgPWLpIYGFGGVLILTLLyrlrksptkeFAVSIVLCGVLEYFTSYFME 512
CDA14276      432 LIFFVFCVTGWVWEVSLHLvadgtfVNRGMLHgPWIpIYGAGSLLILTLLyrlrrkpileFTSIVILSGVIEYMTSYYTE 511
CCX75945       64 MMFFIMSFAGWVWEVSLHFltkgcfVNRGVLHgPWLpIYGAGSVLILLLLnrlrrkpvaeFIAAVALCGFIEYYTSYFLE 143
56_pfamImport   1 LLFFIFAFIGWIWEVGIHIvedgvfVNRGTMFgPWLpIYGFGGVCGIILLkrfidhhvatFFLVVGLCSVVEYVTSWYLE 80 
CDM67527      104 AIF-NKTYWDYSGMKFNINGFVCLKFSIYWTVLTFLTIKYVQP-IINKAFLVYFRLWFVIVPVLFIYIIM 171
CDB99601      444 KVQ-GMRWWDYSGYFMNFQGRICLEGLAVFALGGCAAVYLVAPsLDHLFCKIPMKIKKIICVVLVVLFVV 512
21_pfamImport  81 TVN-GEKWWDYSGYFLNLDGRICAEGLLVFAVGGCTVVYLIAPlLDAFFKRIDRRLATVICVVLLAAFFS 149
WP_022355655  498 MNT-GLKWWDYSGYFLNLDGRICAEGLCVFGIGGMAFIYVLAPvFDNMIAKIKPMMLRVMCVFLLMLFGI 566 Faecalitalea cylindroides
WP_012740806  522 ISC-GRRWWNYNGYFLNLNGRICAEGLLVFGLGGVAIVYIIAPlLDNFFRKIKLRVVGAVCAALIVAFIV 590 Lachnospira eligens
CCZ03809      511 LTK-GMRWWDYSGYFLNLNGRICAEGLFVFGVGGMALVYIVAPiIDSLFRRVNAKFTIIICIVLLTLFIS 579
CDA90154      513 LANgGIKWWDYSGYFLNLDGRICAEGLLVFGIGGFAVVYLIAPaLDNLFRKMKPAAVIVICAILLSVFVC 582
CDA14276      512 CLFnGKKWWDYQGYFLNLDGRICAEGLLTFGIGGMILVYLIAPmLDNYLRKMKTQIAVPLCVILLSLFMI 581
CCX75945      144 IIThGKRWWDYHGYFLNLNGRICAEGLLTFGIGGVVMVYVLAPfLDNLIRRLPMRRLIALCVLLLVLFGA 213
56_pfamImport  81 TFK-HMKYWDYTGYFCNINGRICLEGALIFGFAGCAGIYIMAPfFDDLLKKIPFKARFAACVILVVLFCC 149
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