Conserved Protein Domain Family
GMAP

?
pfam06540: GMAP 
Galanin message associated peptide (GMAP)
This family consists of several galanin message associated peptides. In rat preprogalanin, galanin is C-terminally flanked by a 60 amino acid long peptide: galanin message-associated peptide (GMAP). GMAP sequences in different species show high degree of homology, but the biological function of this family is unknown.
Statistics
?
PSSM-Id: 399504
View PSSM: pfam06540
Aligned: 18 rows
Threshold Bit Score: 95.5777
Threshold Setting Gi: 395544675
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
XP_004759630  56 GKRELPPE-DETRPGGLAGSPAESAAMRTIIEFLTFLHLKEAGALEYLPdlpellptASAED 116 domestic ferret
XP_003774233  63 GKRELQAE-DGMKPGNSESSMADENIVRTVLEFLTYLHLRDAGALDKIS--------VSSEE 115 Tasmanian devil
XP_007497852  63 GKRELQPE-DGMKSGNFARPTTDDNIVRTVLEFLTFLHLKEAGALDSLPl------aISSEE 117 gray short-tailed opossum
XP_014349635  46 GKRELQTE-EDVKLGSFLRSLADDNVLRTVADFLNYLHLKDIGALDNLPs------fFSSEE 100 coelacanth
XP_012958144  62 GKREIQPD-EDIKAGNLGRPLADENIVRTVIEFLTYLHLKEMGALDNLP---------SPEE 113 mallard
XP_003798433  62 GKRELQPE-EEVQPGSFERPTPENNIVRTIIEFLTFLHLKETGALDNLPdlpp-avsVSSED 121 small-eared galago
XP_002821474  62 SKRELQPE-DDMKPGSFDRSIPENNIMRTIIEFLSFLHLKEAGALDRLPdlp---aaASSED 119 Sumatran orangutan
XP_005003089  62 GKRELQPD-GDVQTGSSDRLLPESSIVRTVIEFLTFLHLKEAGLLGNLPgip---laGSPED 119 domestic guinea pig
P47212        62 GKRELQLEvEERRPGSVDVPLPESNIVRTIMEFLSFLHLKEAGALDSLPgip---laTSSED 120 house mouse
XP_005333596  46 GKRELQPE-EEAKPGSLDRSLPESNIVRTLIEFLTFLHLKEAGALHSLAglp---peVSSED 103 thirteen-lined ground squirrel
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap