5FRU


Conserved Protein Domain Family
XylR_N

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pfam06505: XylR_N 
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Activator of aromatic catabolism
This domain is found at the N terminus of a subset of sigma54-dependent transcriptional activators in several proteobacteria, including activators of phenol degradation such as XylR. It is found adjacent to pfam02830.
Statistics
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PSSM-Id: 428979
Aligned: 56 rows
Threshold Bit Score: 84.8823
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5FRU_A            19 LARRLRFAMKEGSIWLGEQRMILLHTAALGALRKELVDTLGMERARGLFMRMGFHSGVRDAELAKTMRSGH-SDFGMLEM 97 
jgi:Desgi_0640     9 ftdLLTVNKDEGLIRFNQNRLLLMESETIFQLREELIQNLGYDIARNVLTRFGYRSGMKDVVAFKNLYYFE-SDADWLLA 87 
WP_006523064       7 LTELLDINKEDGIINFRGHRMLVFLSSYFYELRKEMIDSLGEDIVRGILARFGYRCGFNDATSFQNFPEFE-NDANWMLA 85  Desulfoscip...
Q088E6             8 LRELLAFKPRGGTMSFLGQRTYLTDMVSHGILRKELLSTVDSNVTRTIITRSGFIRGWLLAEQIKRKMPEVwSEARQGKL 87  Shewanella ...
WP_012469017       8 FRELLSFNPQGGVIRFLGQRAYLVDATAQGLQRKEFIDAFGPEMVRTIVTRSAYAHGWRVAETVKTELPEVwAEAKEGKL 87  Geobacter l...
jgi:Glov_0890      8 LRELLSFAPGGGIIRFMGKRALLFDAVALGLLRKELIDTLGTTAARSILTRFGYAHGRRTAEALRQEFP---SLLEDSQT 84 
jgi:Anae109_3191   8 LRELLSFEPGGGVIRFGGERVLLFDAVALGILRRELIDDLGLTAARGILTRFGYAHGRRMAENLRNGFPWA-SESEWRIA 86 
jgi:Hoch_3095     11 L---LELDPGGGVYRFGGQRVLLLDAVALGLLRKQLVEAFGQHAARGLLTRLGYSHGWRAAEALRDTIAWD-DEREWRIA 86 
WP_014399192       9 LKELLAFEPKGGVIRFAGQRALLMDPVTLGLLRKELIGMLGMTAARGIFTRLGYAHGWRTAEAMKTAVPWK-DEAEWRRS 87  Corallococc...
WP_012238940       8 IRKLLDVDARGGVVRFAGERAVILDAGALGTLREELVRLAGYAGARAVLTRFGVEHGARMAEAMVSRLPWD-SEAELHGA 86  Sorangium c...
5FRU_A            98 GPCLHTIEGVVRVTPLTVDIN 118
jgi:Desgi_0640    88 GPKMHTLEGIVHSTCESLEYD 108
WP_006523064      86 GPLMHTLEGLVHASAKILEYD 106 Desulfoscipio gibsoniae
Q088E6            88 GPMVCSMFGFGEVLtshrtdg 108 Shewanella frigidimarina NCIMB 400
WP_012469017      88 GPMLCALYGFGEIVssrrtdg 108 Geobacter lovleyi
jgi:Glov_0890     85 GPRLHTLLGLVEVANstrteg 105
jgi:Anae109_3191  87 GGRLHMLQGLVVIEqppapsa 107
jgi:Hoch_3095     87 GGRIHRLQGLVRFEPVpgdra 107
WP_014399192      88 GGRLHTLMGQVRVERIErtaq 108 Corallococcus coralloides
WP_012238940      87 GALLHTLQGFIRLApgdttpl 107 Sorangium cellulosum
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