6QW6,6AHD,5ZWM


Conserved Protein Domain Family
PRP1_N

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pfam06424: PRP1_N (This model is not part of the current CDD release)
PRP1 splicing factor, N-terminal
This domain is specific to the N-terminal part of the prp1 splicing factor, which is involved in mRNA splicing (and possibly also poly(A)+ RNA nuclear export and cell cycle progression). This domain is specific to the N terminus of the RNA splicing factor encoded by prp1. It is involved in mRNA splicing and possibly also poly(A)and RNA nuclear export and cell cycle progression.
Statistics
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PSSM-Id: 517261
Aligned: 100 rows
Threshold Bit Score: 96.5408
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6QW6_5J       13 APLGYVPGLGRGATGFTTRSDIGP-ARDaNDPVddrhAPP-GKRTVGDQmkknqaadddDEDLNDT-NYDEfng-yagSL 88   human
XP_007375886  11 PPPGYIPGIGRGAVGFVTSVDTFN------K--------GlAVTQAEED----------EEEVYDSnga------neeGI 60  
EMG49445      11 APAGYVAGSARGAVGFRTSTIADSfNRGiVp----------VSHEDDDD----------DEDGTVLdn--------dnGI 62  
CCE73277      11 APDGYIPGVGRGATGFTTSADSGG------LAF----QQGlVLESASED----------DEAQNTNnd---------dGI 61  
XP_006687813  11 APAGYVAGVGRGATGFVTSADAGG-LRSvR---------PfEPSDSEDD----------NGDNNSL------------GL 58  
Q6BSY2        11 PPPGYVAGIGRGATGFTTSADAGS-VRIqP-----------GVVVLDNE----------EEDINGNaede-----nddGL 63   Debaryomyces h...
XP_001386957  11 PPPGYISGIGRGATGFTTSADTGS------LQ------PGfTIENGEES----------DDNLAGEiGDEG-------AI 61  
XP_001483052  11 APKGYVAGIGRGATGFTTSADTGA------------------------------------VRIEDDiEDDGpkidddsGL 54  
XP_011276801  11 APIGYIAGIGRGATGFTTRADVGA-GRLpP------------------Q----------QRDIGSD-DEDNyqdvdedGL 60  
XP_002493977  11 PPPGYVAGLGRGATGFTTQADVGT-GRIvPa----------SFSDEESD----------DEDFVDDrFKDAdetenglNG 69  
6QW6_5J       89 FSSG-PYEKDDEEADAIYAALDKRMDERRKERREQREKEEIEKYRMER-----PKIQQQFSDLKRKLAEVTEEEWLSIPE 162  human
XP_007375886  61 LA-TtRQDADDEEADRIYEQIDQRLQSKQKQEITTVEKDNKV----------------NFTDLKRDLARVSEEQWELLPE 123 
EMG49445      63 LFKKsREDEEDEEADRIFNEIEAKLSCKKQQP----------KVITTT-----DSKKPQFSDLKRQLAELTEDDWLNLPE 127 
CCE73277      62 LGSKkHQDKDDLEADKVYEEIERKLMKKKGNKEPDEVTKKDDs----------VGMKEQFSDLKRALTNVSDFEWQNLPE 131 
XP_006687813  59 LG---GQSKDDEEADRVYDEVERRLQKRHKNTSQLEVVQQDEE----------NQIAQQFTDLKRHLAHVSQDEWANLPE 125 
Q6BSY2        64 LGKKlNRDQDDEEADKIYEEIDRRMKRKRKDTPDDETSLEAV-----------NHTKEQFADLKRALSSVSDEQWESLPE 132  Debaryomyces h...
XP_001386957  62 LASGkNRDKEDEEADQIYEEIERKLQRRKVLKEEAVSEAENQs----------YEIKSKFSDLKRSLSSISAEQWEALPE 131 
XP_001483052  55 LARRgKGDAAEEEADKIYEDIERRLLEKKRKKNEQLVERPPS-----------DDPVSQFVDLKRDLSQVTRDQWAALPE 123 
XP_011276801  61 LG-DkTLNKEDEEADEIYQEIDNRLKNRNKRRISPNDDATTT--GNNGnddnlTKISNQFVDLKKNLSSISEDQWANLPE 137 
XP_002493977  70 FK---EKDDSDNEADQVFAEIEERLKRRNKRKNEVQEDEEPL-----------DEIKKNFQELKKNLTSISEEEWFNLPE 135 
6QW6_5J      163 VGDARNK 169  human
XP_007375886 124 AGDITRR 130 
EMG49445     128 PGDMTRR 134 
CCE73277     132 AGDFTRR 138 
XP_006687813 126 ASDFTKR 132 
Q6BSY2       133 VGDLTRR 139  Debaryomyces hansenii
XP_001386957 132 VGDITRR 138 
XP_001483052 124 VGDLTRR 130 
XP_011276801 138 VGDLTKR 144 
XP_002493977 136 SGDLTRK 142 
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