Conserved Protein Domain Family
COG6_N

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pfam06419: COG6_N (This model is not part of the current CDD release)
Conserved oligomeric complex COG6, N-terminal
COG6 is a component of the conserved oligomeric Golgi (COG) complex, which is composed of eight different subunits organised in two tetramers (COG1-4 and COG5-8). COG is required for normal Golgi morphology and localisation and it is involved in intra-Golgi protein trafficking. COG subunits belong to the CATCHR (complexes associated with tethering containing helical rods) family which includes subunits of the GARP/EARP, exocyst, and Dsl1 complexes, all evolutionary related and have a conserved structural fold consisting of alpha-helical bundles in tandem at the C-terminal and a coiled-coil region at the N-terminal. This entry represents the N-terminal coiled-coil region of COG6.
Statistics
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PSSM-Id: 517256
Aligned: 87 rows
Threshold Bit Score: 77.2383
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_003680489 185 LA-------------RKSMRSDLESELLKDHLTILEELTPIIRRIKRLSTSVEKIKNVGHTIIDDTGKTPTDKkeQTLEK 251
XP_007875350  27 ISqtelk---ndeisKKKFKIDNVSNIISINTKIIQEFEKIIIELKTFKDYISTIKNLTNEMEKEADIISLKS--THFLK 101
O94677        48 LSerkfk---nereaRKQLPFEVFSDLIWTNGSIIKELSELSSQTLSVQSQLLKVKNSIDSYKNEWSKKTNDA--QILLN 122 Schizosaccharom...
Q21270        42 LVedmnl----dsnvDRKLHNKLERYELRLNKEYLSEFEKINNIVQKFDELCVKMNSTCTNLSKQMETVKFKS--VDLVQ 115 Caenorhabditis ...
XP_002901619  47 LDasetp---tlatlRRNLRSSLEHQQLALAQKALDGLERTLEQVSNLANQVDALDTKCDHVHKFLETTKRET--QQVQT 121
P0CM80        74 RRtlkgq---saaiaRKYLKQDIETCLATGSTKFLEAFAEVDQKLNVLREHMQEMQVRCDQVQSELDQANSGT--KFLLE 148 Cryptococcus ne...
XP_012187920  99 tstteqlqlvdtaraRRDLDKDIRQRMLSATDNIIAVLQTVDNGLVRLSDDVAAMHASCDAVQDKLRAAEESS--RYLVE 176
XP_006676051  59 LSdiypq---ntpsaRRNLKSHVEKQVSGVSKEFLAAFDALHSQLIGIESHIDSIGNRCEQMDIQLKAAYKNA--ASVLK 133
XP_025180404  51 LSefysnnnnnsliiRRNLRGNIEQKAIEANRNFLEIFGKITEQLAVIESEVKSMNTFCNEIEKSLESANRQI--AVLLE 128
EPB90567      52 LSnipdl---deislRRNLRGTIEKKEIETNRKFLLAFEKVVQQFERLETQMGQMESVCKDMEQRIVKAESHT--ADMIE 126
XP_003680489 252 NIESLQSDIKHLKLKRQILFAIKDQFTLNQVEDDIVTNG 290
XP_007875350 102 QITTIYDRKILINTKQSLLKSFNNNFIIENEDLEILSSI 140
O94677       123 SYETFCEEEALIEEKLKNIEIFEKNFVIMDDDLIHLTSS 161 Schizosaccharomyces pombe 972h-
Q21270       116 KTASLKEKKASIESRCNMINEFLENYSLSSEELRELDEC 154 Caenorhabditis elegans
XP_002901619 122 EAAALATKRDKVQEAWKETKTFLDRYQLTEEEVRVLYTE 160
P0CM80       149 RADVLRSQRDSAQLRAHLITLFLSRFTLSNSELTALTSR 187 Cryptococcus neoformans var. neoformans JEC21
XP_012187920 177 HAEGLERQRAAALTQVQVAKLFLSRFTLSEAERASIYSR 215
XP_006676051 134 HTQDMKTKSEQASYRKVVVDALLERFTLSDTEIRLLATS 172
XP_025180404 129 QSDSLKSQRETCKTRKILIDAFLKRFTLSEKEVTVITSP 167
EPB90567     127 QADIMQEHSNACSTQIAIVDRFLAKFTLSEQEIKILSNM 165
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