Conserved Protein Domain Family
MmcB-like

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pfam06319: MmcB-like 
DNA repair protein MmcB-like
This family includes Caulobacter MmcB (CCNA_03580), which is involved in DNA repair. It has been proposed to be an endonuclease that creates the substrate for translesion synthesis.
Statistics
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PSSM-Id: 428885
Aligned: 9 rows
Threshold Bit Score: 213.082
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5FPB4          7 ENPAATSCGLPETQLAIRRAVLGLCRTINWAAINEFALpAAGRRADIMALLPDHSLTCIEIKSGLRDFQTDQKWPEYRDW 86  Gluconobacter ...
jgi:Oant_0151   8 QTHPLSDGRQSENAMLVRRGVQRLFLEMGLATLPELPL-ASGRRADLMAVNRKGEIWIVEIKSSIEDWKADHKWPEYRAY 86 
Q92TA2          8 GDNPLADGRQSERAMKVRRGVQRLLMELRHAALPELTL-ASGRRADLISLSPKGEIWIIEIKTSIEDFRVDRKWPEYRLH 86  Sinorhizobium ...
vbi:Avi_0062   33 VKNTLIDGRQSERALMIRRGTQLLLDQMRHAVLPELSL-ASGRRADLISVSDKGEIWITEIKSSIEDFRVDRKWPDYRQH 111
Q7D2A6         38 NNNPLIDGRQSDKAMLVRRGVQVLLHEMRHSVLPELPL-ASGRRADLISLSAKGEIWIIEIKSSIEDFRVDRKWPDYRLH 116 Agrobacterium ...
BAF90649        5 APVPKPDGRQSQTAAAIQRGVLRFLAAHGQAGLPEVSL-ASGRRADVLALDAKGALSIIEIKSSVTDFRTDAKWPEYRPF 83 
jgi:Snov_4009   6 LVMP-IDGRQSEMARAIQRGALRYLGARGLVGVPEFSL-ASGRRADIAAIDMRGEVWVVEIKSSVIDFRTDRKWTDYRFH 83 
WP_011083725   11 VPPP--DRRQSETALAIARGTARLLRSLGFSCISELPL-PSGRRADLVALNERGEIWIVEIKSSVEDLRADQKWHEYRAH 87  Bradyrhizobium...
WP_013654972   14 lDDPLTDGRQSETALKVWRGAARLLRSLDFACLSEVVL-ASGRRADLLALGPRHELVIVEVKSSVADLRADSKWPDYRLH 92  Polymorphum gi...
Q5FPB4         87 SDRLFFAVDDGFPLDLIPPDVGLIVVsvsavpaalrDSILAEctIIREPTLHKLAPARRRTLLHLFATTAASRLMSLEDP 166 Gluconobacter ...
jgi:Oant_0151  87 CDRLFFATHPAVPREIFPQECGFILS----------DGYGAE--IMRDAPEHKLPGATRKALMLRFARAGAARLTIAELA 154
Q92TA2         87 CDRLFFATHAQVPLDIFPEECGLMLS----------DGYGAH--MLREASEHRLPPSTRKSVTQAFARTAAQRLTLAEWA 154 Sinorhizobium ...
vbi:Avi_0062  112 CDRLFFATLPDVPQEIFPQECGLIVS----------DGYGAH--LLRDAPEHRLAPATRKSVMLAFSRAAAQRLMRAEWD 179
Q7D2A6        117 CDRLFFATHPEVPTDIFPEECGLILS----------DGYGAH--MLRDAPEHKLPPATRKSVMLDFSRTAATRLMLAEWT 184 Agrobacterium ...
BAF90649       84 CDRLLFAVGVDFPLELLPDDVGILVA----------DAFGAE--LIRAAPEHPLAAATRKALTLRFARAAAGRLAGLYdp 151
jgi:Snov_4009  84 CDRLFFAVGPDFPLDILPEDTGIMVA----------DQFGAG--LIREAPHHPMPGATRKALTLRLARTAAGRLMGLMDp 151
WP_011083725   88 CDRLFFAFTQDLPCEIFPQGTGLIIA----------DAYGAH--LHCEAPEHKIAAATRKQMTVRFAMAAALRINRLVDP 155 Bradyrhizobium...
WP_013654972   93 CDRLYFATHPGVPAEIFPDDAGLILA----------DGFGAE--ILRDAPEHRLTAATRKALTLRFARHAALRLHDLADp 160 Polymorphum gi...
Q5FPB4        167 A 167 Gluconobacter oxydans
jgi:Oant_0151 155 G 155
Q92TA2        155 A 155 Sinorhizobium meliloti
vbi:Avi_0062  180 A 180
Q7D2A6        185 T 185 Agrobacterium fabrum str. C58
BAF90649      152 d 152
jgi:Snov_4009 152 e 152
WP_011083725  156 Q 156 Bradyrhizobium diazoefficiens
WP_013654972  161 d 161 Polymorphum gilvum
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