Conserved Protein Domain Family
Ifi-6-16

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pfam06140: Ifi-6-16 
Interferon-induced 6-16 family
Statistics
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PSSM-Id: 399266
Aligned: 55 rows
Threshold Bit Score: 29.9228
Threshold Setting Gi: 300101560
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:THAPS_7140 412 GGTVVLAAPFAvmgvIGVMGFTSAGISSGSIAAWMMSAEaiasgGGVLAGGTVATLQSIGAA-GLGIGGtiTSMCAAAGG 490 Thalassiosira...
3_pfamImport     3 AGLWGLAMPVV-----NMIGFSASGIVSGSAAASMMSTAaaasgGGVVSGSAVAVMQSIGAV-GLATPI--GLGLVAGGA 74 
20_pfamImport    3 GVSSVIVLSVV----VPGLGFAAGGIVAGSYAAGMMSSAaiasgGGVAAGSTVAVLQAIGAGgAATAAA--SGAIGAGSG 76 
EXX68855        47 GLASAIVAPFIisaiIYALGFGTGGIAAHSFGSWFMSLYg----GVIAHGSLVSILQSIGAA-GLGSLG--IFLSSSFGA 119 Rhizophagus i...
EXX68851        47 glVGAIVAPFIltaiIRGLGFGLGGIAAHSFGSWFMSLYr----GTIARGSVVSILQSIGAV-GLGALS--IFLSSGFGA 119 Rhizophagus i...
NP_001278862    16 AVAAVVLAPVA----LTVAGFTSAGIAAGSLAAGMMSSAavangGAVAAGSLVAVLQSAGAA-GLSAGA--AAAVASVGG 88  zebrafish
NP_001243642    19 AVGAVALTPLA----LSMAGFTAAGITAGSTAAGMMSTAavangGGVAAGSVVALLQSAGAA-GLSSAA--TAGVASVGG 91  zebrafish
XP_005815166    14 aggaavaaPFV----LGAIGFTSAGIAAGSLAASMMSGAaiangGGVAAGSAVAVLQSAGMA-GLGTAA--TSAVAGAGG 86  southern plat...
XP_003447811    13 agGAVVSAPVV----LGAVGFTSAGIAAGSYAASMMSAAavangGGVAAGSLVAVLQSAGMA-GLSGAA--TAAVGSVGG 85  Nile tilapia
XP_030837693   138 GIGAFIAAPFV----LVGMGFTTAGIASGSIGAGMMSASaiasgGGVAAGSAVAVLQSVGAAgGLAATA--CAGLGIGGA 211 purple sea ur...
jgi:THAPS_7140 491 VVGA 494 Thalassiosira pseudonana CCMP1335
3_pfamImport    75 AIGG 78 
20_pfamImport   77 AIGA 80 
EXX68855       120 AIGI 123 Rhizophagus irregularis DAOM 197198w
EXX68851       120 AIGI 123 Rhizophagus irregularis DAOM 197198w
NP_001278862    89 VIGG 92  zebrafish
NP_001243642    92 AAGG 95  zebrafish
XP_005815166    87 VLTG 90  southern platyfish
XP_003447811    86 AVgf 89  Nile tilapia
XP_030837693   212 AAit 215 purple sea urchin
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