Conserved Protein Domain Family
WxLIP_PGBD

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pfam06030: WxLIP_PGBD (This model is not part of the current CDD release)
WxL Interacting Protein, peptidoglycan binding domain
This domain (previously known as DUF916) is found in WxL interacting proteins (WxLIP) which play a role in virulence and are widely distributed in firmicutes. The WxL proteins usually occur within a gene cluster that contains two WxL proteins and a WxL interacting protein composed of three domains: peptidoglycan binding domain (PGBD), host binding domain (HBD), and transmembrane helix (TMH). The domain represented by this entry is involved in binding to peptidoglycan and to WxL, and anchoring the protein cluster onto the bacterial surface. This PGBD domain is frequently found in combination with HBD domain (pfam11797) and both were shown to function synergistically as a single unit that binds to the peptidoglycan and interacts with the eukaryotic host. The PGBD domain is predicted to adopt a beta-sandwich with an Ig-like topology.
Statistics
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PSSM-Id: 517079
Aligned: 59 rows
Threshold Bit Score: 92.6473
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_236659091  36 SVSTNIPDNQIDKNQ-TYFDLLMEPGKEQELEVVLRNNT-DKEVTMLADVNTAITNDNGVVDYSwnvasgleQAKINnkd 113 Carnobacterium ...
2_pfamImport   2 SVQPSGPKGPTGR---NHFIYDVAPGSTLFDYVGVTNLS-DRPLTFQVYATDAFTTVDGAFSLL--------PANQE--- 66 
WP_003640838  39 ILTPLLPKDQLDKQA-GYFNMKVTPGTTSTFRVSVSNPG-KSAITLQVTPVNATTSDAGSVAYV--------PSKRH--- 105 Lactiplantibaci...
Q9X336        42 DVSIHVPDNQLGDIK-KYFNLQVKKKQNQTVKMDVHNKA-NTPIKVNVKVANALTSTNGGIMYIpt-----rEVSQS--- 111 Bacillus anthracis
WP_015509449  33 TVTPELPQNQVSDV--TYFDLLVNHETEQNLTVALHNTS-SETLTIQASALNSYTAASGIIAYQ--------AAETA--- 98  Enterococcus ca...
Q38UL7        19 TVSANIPDNQYNEAL-SSFDLVMKPNQTKTLSVVIENLE-DNTKTISAAANTGYTTDSGTEAFD--------KHNPG--- 85  Lactobacillus s...
Q1WV21        41 TISPVYPHEQKEDDA-GYFDLNVKKLITVPVKVKISNLNkNQDIEYLIKVGNATTNDNGTINYT--------NFKNK--- 108 Lactobacillus s...
BAK58335      35 TVTPVLGKGQTDPAA-GYFSIKAEKNTSYPVTVAVQNLTeNETQDFDIQLVQATTSNNGHIDYT--------P-SSK--- 101
Q38UU8        36 MLMPELPKDNIGGKQlGYFNLHIKPNQVKTIRIKVYNPT-EHTINIYGQVKDATTNDNASVDYL--------GSHAN--- 103 Lactobacillus s...
Q38ZA5        40 MIYPEIPKDNLGGNKlGYFNLKLKPNTEKTLKIKAFNPT-NKPIKVKVSAKDAQTADDGRIDYL--------SDDPV--- 107 Lactobacillus s...
WP_236659091 114 eantkidlksigYDS--TLKQ-PLSEMASID---KEIKIPAKSQVTAKVKVKMPDEQIDGVIAGGIYLTQ 177 Carnobacterium maltaromat...
2_pfamImport  67 -----------------PTDVgSWTRVEK-----KSVTVKPGKRADIRFEISVPTNATPGDHIGGV---- 110
WP_003640838 106 -------------DP--SATT-TFTDMTSSG---VVVKLAAHQAKTVAFKTTIPKSGFQGEVLGGLFVTn 156 Lactiplantibacillus
Q9X336       112 ------------ILT--DTDF-YMDQYVQAP---DAVTLEENQTKTIEVHLTAPNQG--GVFLGGLLFEl 161 Bacillus anthracis
WP_015509449  99 ------------EDFggV----SFTTLIKKPn--QMIQLEPGETRQVVFPLSMNDKRFTGEILGAFSFEE 150 Enterococcus casseliflavus
Q38UL7        86 ------------KLS--QAEY-QFSQLFDQP---QMITLKPKETKTVNFKVKMPDQLYAGVLKGALYFKD 137 Lactobacillus sakei subsp...
Q1WV21       109 ------------KDT--TAKY-QLTDFISKTelkQKVTVKAGSSSEVTVNLKVPKQKFPGTIAGGIYVER 163 Lactobacillus salivarius ...
BAK58335     102 ------------KME--AGGL-SLKDLVEDKkatQKVTVAAGQTKNITFNLKLPQDNIKGTVLGSVYVRK 156
Q38UU8       104 ------------NQQ--LLKK-PGSQLVTVP---KKTSLPAGATKRIAIKVKTND-GFKGTKATAINLSa 154 Lactobacillus sakei subsp...
Q38ZA5       108 ------------SKQ--LLPE-PGSQYVHFK---LQVVVPANTQKWVNVNVKMPDTAFKGKKAFAINLAa 159 Lactobacillus sakei subsp...
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