Conserved Protein Domain Family
Nop52

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pfam05997: Nop52 (This model is not part of the current CDD release)
Nucleolar protein,Nop52
Nop52 believed to be involved in the generation of 28S rRNA.
Statistics
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PSSM-Id: 517066
Aligned: 98 rows
Threshold Bit Score: 170.142
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_007412489  45 GDTIPLGKFLASNDKSTRDRAV-AALRTFISNSDqTPNdlfsiiefdnedwnshtsiddarLDNLSMSKLYKGLFYCYWM 123
A0DRZ8         3 TVSVDFLQQITLLDPMNRKQTI-TELKKVLTKP----------------------------LLISDFKKIWKALYYAMWS 53  Paramecium tetr...
XP_002140253   6 VLLIRLGKTMTSIHANSRRRGL-QIIEKFILKHKsS-------------------------LNSLQMIKLWKGLYYCLWL 59 
EFJ10035      18 IQSGGLPRRLASVDKKVRDRAV-ELLASWLECRT-S-------------------------VDEADLRKIWKGLFYCYWH 70 
XP_003580721   9 TEAAAIARRLASCNTSARVRAVrYLLSDFLPASAaH-------------------------LSPTDLLKLWKGLFFCFWH 63 
XP_004242913  22 TQGTSLIKHLAACNASIRSKAF-AHLQTWLVTQTq--------------------------LDDDDMKKLWKGLFYCLWH 74 
XP_002874005  18 EDCKSLIKKLASCKQSIRDRSLrTVLRTWLPEQT-E-------------------------ISDEDMKKLWQGIFYCIWH 71 
XP_009022139  11 ERIFRLVRKIAGNEPLLRSKSF-KRLKLFLKNLPaS-------------------------TTNLTMAKLWKGLHYSMWM 64 
XP_002678872  50 ENVVKLTKDLAATDEGFRTRAA-ERFPTFLKETKfNKLdl--------------------dTNFIDFRKLWKGALYGFWL 108
Q4U973         4 DIIRSICHNLANTDSNLRKRAI-RSVRELFKKNP-N-------------------------LDDLSLSKICKGLYYCLWM 56  Theileria annulata
XP_007412489 124 SDKPLIQQQLANELSDLCLVYRPNPLgsstafn----qiqttkgALRFWKAFWVAIRAEWHGIDRHRIDKYLLLCRRFLG 199
A0DRZ8        54 SDKYQNQQILATEISQLTRMFYSNFTa-----------------FIQFSRAMFHVFMLEWEKIDYWRINKFMLLFREIIE 116 Paramecium tetr...
XP_002140253  60 ADKVPIQREIAINISKFQRLFASVEL------------------WNSFIYEFYNMLTQRWDIIDRLRMDKFMFLQRVMIA 121
EFJ10035      71 ADKAIVQADLAERLASLIQRLPSELA-------------------LQFFEGYLGTMRREWGGIDHLRMDKFYLLQRKFVS 131
XP_003580721  64 SDKPLYQSSLASSLAGAVSSAPSPAA------------------AAAFLSAYLATIRREWPHIDVHRLDKFYLLNRRFIN 125
XP_004242913  75 SDKAPAQALLINRICSMVKTLDFGLC-------------------LHYFSAFLITLRREWNGIDHLRLDKFYLLIRKFLR 135
XP_002874005  72 ADKSLYQSELIDRLSSAIQSLPLSLS-------------------LHYFTVFLFTMRREWSRIDRLRLDKFYLLIRRFLH 132
XP_009022139  65 ADKMIFQEQLADSISTIIHTLPSDEL------------------SMMFFDAFLQVEAHEWHLIDDLRMDKFLRLVRFMFR 126
XP_002678872 109 CDGEFKQHEMAQLLAECIHHVKGGESsph-------------elPIAFLRAFFDELFETWPRLDKHRMDKYLMLVRKVMQ 175
Q4U973        57 SDDPIQTRILSLDIIQLYKSIRLNSSnlngveepllfdhnevdiRLRYLKCLMETVSREWLLLDKNRVDKVLLFTRIYVS 136 Theileria annulata
XP_007412489 200 VGLRLLQ--RVH-WNQKAIEEWSE-ILQETVLn----VSDPTNPMSLAYHFCDIFLEEL-----NKTLqpisssnes--- 263
A0DRZ8       117 EQIKICK--HFN-W--KTVPQLIA-LYNETVLn----LTEFQTVQGAALHFIQIFVQCM-----AKHMsd---------- 171 Paramecium tetr...
XP_002140253 122 ESLDIIK--KSE-YDKVYIEHLLN-TYKMCIF--------TTSSIGISLIFCHQFPQEF-----VYFLnsqfsek----- 179
EFJ10035     132 SMFMALR--QQR-WDKEIVQRYMD-ALKNRAFl----SNDLFPAQGCSMHLADIFLEQL-----DGVL------------ 186
XP_003580721 126 HAFLFLR--AHA-FAPDVTSQIIS-VVSEKALlpeadTPSAGTSRGLGYHVADAFVDEL-----LPVL------------ 184
XP_004242913 136 VVFELMK--KYG-WNLEIMVKCNE-ILENNAFl----ATDKLLGHGVNYHIASVFLDEL-----KGCf------------ 190
XP_002874005 133 GFFSLLD--SNS-WDLEFTRRLMG-VLFDGTFl----AGDKFQGNGVNYHIASTFVEEL-----RPFL------------ 187
XP_009022139 127 ETFRFMNssKNN-WSQMVSKKFCS-SLSKT-------FNDPKISLNLLFHILDFFLDEL-----ERVAg----------- 181
XP_002678872 176 QAFVFLN--KTAqYKLEAVEEFIEfILEDGIFn----NEERKLLASLQIHIAELFFLEL-----VQYGgpqve------- 237
Q4U973       137 EILYYMH--ELN-WDLLVLNKLSE-IFLNKNIf----GRDTL---GLLVHVIQVFTTELlynyeQLKGsgeetkepptds 205 Theileria annulata
XP_007412489 264 ----------------eseseietESLRAPINSLLSPFLYALSNsRPGIAIFQKIIETILiplfenfeahlttdERF--- 324
A0DRZ8       172 -----------------------sTVSYVQVKELLEGFLDILKH-SPNKTLRDKTIQYVY---------------EY--- 209 Paramecium tetr...
XP_002140253 180 ------------------kcnyerSNINVLFELIAELFVNIIRD-CNNRVVIKTIHEQLI--------------RRF--- 223
EFJ10035     187 ------------------------PEEKEVLGILLEPFYATLAL-GPDKNVLKRVKEGVF--------------DRL--- 224
XP_003580721 185 ------------------------PVSLQSMELLLAPFFTVLEK-STDRVLVNKVRSNLF--------------ERF--- 222
XP_004242913 191 -----------------------vPVQEDVVFCLFKPFLSVLGK-SEDKIMVGKVKNCVF--------------EEL--- 229
XP_002874005 188 ------------------------PLRKEVLELLLAPFVTILGV-VTDKILVGKIKSNLF--------------EEL--- 225
XP_009022139 182 -----------------------sEYPEQFIKSVTRVFIDCISK-TNNEYLAKEIKKLYL--------------NKI--- 220
XP_002678872 238 -------------------ndsdyHLNEDALMKFVQFFIKDFAS-TENNSIKKTYKEEMF--------------DLLaqy 283
Q4U973       206 ddnvnfneddskskinavhmnlcnNIDSVKLLYILKPFILMFVT-SKDSLLLKTIYDYIFke-----------lEKL--- 270 Theileria annulata
XP_007412489 325 --IPSSSTIIIFDSFSTQLCLSNQS---SINDL----------------------------------------------- 352
A0DRZ8       210 --IEERQAQESYLPAFDSKKYGNYVfklASSENv---------------------------------------------- 241 Paramecium tetr...
XP_002140253 224 --TNIDSLLKDSLIEGGLLDISDITisqYTKEVidiflqivcrk-------------------------------lfgla 270
EFJ10035     225 --LEAARESVKSENKLAEFVTSLPMekrlfel-----------------------------------------------a 255
XP_003580721 223 --LESGNQLLEMMKKGVEVENGSAEeklGKVGLlfgfskrfl-----------------------------------dig 265
XP_004242913 230 --LKIGRSLLERRKEGVEVDESYDDv-aFGIIAlktgfsgklf----------------------------------evg 272
XP_002874005 226 --LKMGKKLLIIKKSGNDVVPEDDDvvvLGSIAltmefakrfy----------------------------------emg 269
XP_009022139 221 --ATSQYKMTEATLKEMSFSRASKKn------------------------------------------------------ 244
XP_002678872 284 qsVEGESKPEEEEEEEETEENGDAMeddEDDDEdlpldefgnvrqivkdrplpvnierivkefekyktgyensdvcveyy 363
Q4U973       271 --SKITSVNLIVHLLESILNTSGETspgKEIDVvkginkkfirntlkl------------------------yqsnlsqs 324 Theileria annulata
XP_007412489 353 ------KLIRSQVLKSI 363
A0DRZ8       242 -----nPQNRKALYRVA 253 Paramecium tetraurelia
XP_002140253 271 sskeinQSNRNILYKSI 287
EFJ10035     256 asadtlQGNRKVLYALS 272
XP_003580721 266 anvetvLANRKVVFALR 282
XP_004242913 273 ssmdcvQGNRKVVLKLH 289
XP_002874005 270 stpechQGNRKSIFALH 286
XP_009022139 245 ------CKNRPILFSLV 255
XP_002678872 364 ekfktrIITLDDLYSEL 380
Q4U973       325 ltpaekLHLEQLLYSIF 341 Theileria annulata
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