Conserved Protein Domain Family
Phage_GPD

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pfam05954: Phage_GPD 
Phage late control gene D protein (GPD)
This family includes a number of phage late control gene D proteins and related bacterial sequences. This family also includes Bacteriophage Mu P proteins and related sequences.
Statistics
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PSSM-Id: 399150
Aligned: 81 rows
Threshold Bit Score: 83.5162
Threshold Setting Gi: 489204114
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q6F782                42 YHAIN-DGLSVELICISTNPYLSLKQ-FIGCQAAIDQVTD-----TGKLFRTTGIITEA--SQGQS---DGA-LTL---Y 105  Acinet...
jgi:Rmet_4796         39 VERLG-DPYRVTVQLT-HPVDLDRAE-YLNRNATFVIHAGd----DSEPRKFAGWISEF--SKTRQ---TRD-FCG---Y 102  Cupria...
wugsc:KPN_02273       34 AEKLS-ELYYYTITFTSAEKNIDAAQ-LLSKPAMLTM-GGgalqqLADCKRVHGVVTAF--RRISS---SED-QSK---Y 101  Klebsi...
Q3A0Q0                27 KEELN-RPFAFDVSVL-ADSFAALLD-CLGAPVSLFMTAP-----DGYERRLNGILTEA---RVETdlaDGR-SIV---- 90   Peloba...
WP_003113193          30 kpGMEsDSLTLRID---DRDGQVALP-RRGAVLEVHL----------------GYAGEPl-MRMGRftvDTL-QWAgppD 87   Pseudo...
Q9PAL7                30 sdesgshADTLEVVLADHLPNAPLKLpPMGAELELAL----------------GYDGQL--RPMGVfvcSEIqLSGw-pA 90   Xylell...
Q63LB9                54 srsdEaDTIDIVLD---DS-KNDLDIpKRGATIKASI----------------GWAGEPlvD-KGSfvvNEVeHSGa-pD 111  Burkho...
P10312                42 NRGFEaDQLDIELN---DADGQVGLP-VRGAVLTVYI----------------GWKGFAl-VCKGKftvDEVeHRGa-pD 99   Escher...
goetting:EBL_c29800   53 nRSLEsIAGEFDLTITARWSAAAPRSiKPGQSCTVSVG---------NDRVMTGYIDDF----IPSy--DAE---N---V 111  Shimwe...
Q63K62                45 rDAIS-QPYRFEITLVSRQLRIDFAK-MLSRGATLAILPPf---gEAGTTRYAGVLAEF--EQKKR---FRD-FTV---Y 110  Burkho...
Q6F782               106 RLRLQDATSLW--------HKR-RNSRV------FMN-KSVVEIIEIVFREWqskSPLFAATLKLDTShltnkqYDIRPF 169  Acinet...
jgi:Rmet_4796        103 EIVVEPLVSRL--------RLT-QASRI------YQQ-KTAPQIIEAVLRRHd--LKGHQFAFNLRRK------YPQLGF 158  Cupria...
wugsc:KPN_02273      102 QITLEPFLSLL--------DKQfRSHRF------FVN-KSVPEVVEQVLQEHh--LHDWEYEFNLKQH------YPRREQ 158  Klebsi...
Q3A0Q0                91 CLSVASRLALL--------QLR-TDSRL------ILS-ETLPAIVRQTLCRNg--IDENALRLELARQ------YPVRPS 146  Peloba...
WP_003113193          88 CLTVTAKAGDMrg-----sGKT-IRSGG------WEG-TTLAQVCRDVGA--------R---NGWRVEcp---lQVAIAR 140  Pseudo...
Q9PAL7                91 TMTLRAHAAPWegtpkgksDLQtQKTRS------WPAgTTLGAMLSTMAA--------E---HGMTSAispslsGVALPH 153  Xylell...
Q63LB9               112 IITIRARSAAMt------sGMQeRREKS------WHR-QTIGSIVHAIAG--------R---YSLAPIvgdalaRILIAH 167  Burkho...
P10312               100 VVTIRARSADFr------gTLNsRREGS------WHD-TTLGAIVKAIAT--------R---NRLEASvapslaGIKIPH 155  Escher...
goetting:EBL_c29800  112 SLRVMGRDKTG--------DLV--DSSVvdkagqWKG-LKLEQLASTIAK--------P---YGIEVInetdtgDAFGSI 169  Shimwe...
Q63K62               111 RATLVPRLWRL--------SLY-KASDV------YLNeQTIPDIVKRVLRAAs--FGSR--DFRMRHgg----gYRKRSF 167  Burkho...
Q6F782               170 SMQSNESDYAYLTRLMREEAINWLIDEsNYLvmsqtqaiePQYLRLVDQNTEYSClE--RSSIRYHRSHATEQ------Q 241  Acinet...
jgi:Rmet_4796        159 RMQHQLSDWDYIRLLMEQNGIYCYF---APGk-------fGEQIVFGDDIDHYIYlP--QRIVPYRETAGLESg-----Q 221  Cupria...
wugsc:KPN_02273      159 INQYQESDLAFIQRLLAEVGIFYFFTL-QEEa-------qSEVVHFADAQRALMF----DKTLPVNSPSGMSDs----gT 222  Klebsi...
Q3A0Q0               147 TLQAQENDLDFLLRLTGRQGMFIW----TDAad------dHEILHIADTTNRCPM-L--ARELLTYTPNAGMEtdkgpgK 213  Peloba...
WP_003113193         141 VDQVNESDYHFVTRLARQYDCTAKLAE--------------GMLMVLPRQSG--Q-SatGRRIEPLVLGRADV------- 196  Pseudo...
Q9PAL7               154 IDQTEESDINVLLRLAQRYDAIAKPAG--------------GRLIFAKRGES--K-SvtGIDMPRITLTPDEI------- 209  Xylell...
Q63LB9               168 IDQTHESDMSFLTRLAKRYDAVMNVKD--------------LRLLFMPIGTG--Q-TasGKQLDVLELTRASG------- 223  Burkho...
P10312               156 IDQSQESDAKFLTRLAERNGGEVSVKM--------------GKLLFLKAGQG--V-TasGKKIPQVTITRSDG------- 211  Escher...
goetting:EBL_c29800  170 TLEQGETGFELLDRLAKQRGVLVT----SDA---------WGRLIITRASTQr------AGVALVLGENILAArgrfswR 230  Shimwe...
Q63K62               168 VCQYDESHLDFVSRWMEKEGLYYYFEH-DGR---------HETLVIVDDRRH-QPgPadDLALRYLPATSLDAgi---eA 233  Burkho...
Q6F782               242 DSITSLIAQRQLQSTAIYVQRWQAdalSQEDASgsvlsnhqh-----------------sqqhgnesLSLEQ-------- 296  Acinet...
jgi:Rmet_4796        222 ETVFSLKTHAKTIPESFRVADYNQ---NKAWERl---------------------------------TGDANva----rk 261  Cupria...
wugsc:KPN_02273      223 ESIWGLSITHNVVEANVTTRDYNP---RDAQSVlq------------------------------saTADMTrgn---ge 266  Klebsi...
Q3A0Q0               214 VGMLGIIDRAEMVPARHWVHDVHE---NAPEHPils-----------------------------grASDQAnap---ar 258  Peloba...
WP_003113193         197 -GSFDVTFDDRSLMRTVKTRYQLP---GSGEVKsv-------------------------------eLKNPKapa---ta 238  Pseudo...
Q9PAL7               210 -ASWQMTYATRDSPGTVVAFYRLA---RRAELH----------------------------------QVSVGd------- 244  Xylell...
Q63LB9               224 -DSHRYHVSERENYAAVRAHYHST---GRAKRK----------------------------------SVIVGge----nn 261  Burkho...
P10312               212 -DRHHFAIADRGAYTGVTAKWLHT---KDPKPQkqkvklkrkkkekhlralehpkakpvrqkkapkvPearegeymagea 287  Escher...
goetting:EBL_c29800  231 ERASQYI----VKGSSSAGGSTWD---EQPVKV----------------------------------VGGRq-------i 262  Shimwe...
Q63K62               234 DRVQAFTCRATPLPREVVLRDFNH---RKAELS----------------------------------LEVRErvar-dgv 275  Burkho...
Q6F782               297 AWNISPAwmTDLNGedqaTASDS----------RQLEKLNKQLHLYQALQAKSFTA--YSSVRD---------T-QVGYW 354  Acinet...
jgi:Rmet_4796        262 ENTYGQS--YVFG------TNHLd--------fDEAKWEALLRHEAKYAEQLVYAG--ESNVLA---------L-CPARI 313  Cupria...
wugsc:KPN_02273      267 GITYGEV--YHYK------LRHRergdkidpqtETANFYARLDHERFLAHQTLITA--ISTAAW---------L-APAQV 326  Klebsi...
Q3A0Q0               259 DAAGTSA--VNFGSgl-aNE-------------EEAKHEAVIRAQRSNCIRQTLSI--RTHAAD---------L-RAGAI 310  Peloba...
WP_003113193         239 MGEHVDR--HLY--------TSR----------GEAEQAAKARLASFSRSSASVRL--ELPGRGd--------L-FAERS 287  Pseudo...
Q9PAL7               245 GHPVHRI--KQY-------LPDA----------AAAIAAARGELSRRARAETKLTLe-MAGRAE---------L-SAEAV 294  Xylell...
Q63LB9               262 KNVKVLP--EDY--------ATE----------AEARAAAQAEFKRMQRSQATMSYtlARGRAE---------L-FPEMP 311  Burkho...
P10312               288 DNVFALT--TVY--------ATK----------AQAMRAAQAKWDKLQRGVAEFSIslATGRAD---------I-YTETP 337  Escher...
goetting:EBL_c29800  263 VVSDPEI--TRYRPkilvNEDSL----------TVGGASARGEWYKTRMLGESNTT--EITVAGwrengvsgpLwQINRL 328  Shimwe...
Q63K62               276 GERVSSD--EHF--------HTK----------DEGQRYAKLRAEALVCEGRRFAG--ESTAAG---------L-RAGRF 323  Burkho...
Q6F782               355 FRLVDHPeldkNHDESDK-EFLIVSKHFYNQNNL 387  Acinetobacter baylyi
jgi:Rmet_4796        314 LRLDL------ALPDAPN-GQVITEVVHTGARDA 340  Cupriavidus metallidurans CH34
wugsc:KPN_02273      327 LTVTDSLps-tLPAPVQD-PLLITGTGFTASRRE 358  Klebsiella pneumoniae subsp. pneumoniae MGH 78578
Q3A0Q0               311 IRLDTSG----YSCTLGG-DYLIVSVEHTARQYG 339  Pelobacter carbinolicus DSM 2380
WP_003113193         288 LLLQG-F-----KAGIDG-EFLIDSVEHTYSSSg 314  Pseudomonas
Q9PAL7               295 LTLNG-W-----REGVNG-DWLVTRVQHCLDKNG 321  Xylella fastidiosa
Q63LB9               312 VTVSG-F-----KPEIDEtPWLVKKTTHTIGDvg 339  Burkholderia pseudomallei
P10312               338 VKVSG-F-----KRVIDEqDWTITKVTHFLNNSG 365  Escherichia virus P2
goetting:EBL_c29800  329 VKVTDA------IQQLDV-TWLIKTVSFMEGDGg 355  Shimwellia blattae DSM 4481 = NBRC 105725
Q63K62               324 FALSGHY-----RQDFDG-RYLVTALTHRGSQah 351  Burkholderia pseudomallei
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