Conserved Protein Domain Family
Penaeidin
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pfam05927: Penaeidin 
Penaeidin
This family consists of several isoforms of the penaeidin protein which is specific to shrimps. Penaeidins, a unique family of antimicrobial peptides (AMPs) with both proline and cysteine-rich domains, were initially identified in the hemolymph of the Pacific white shrimp, Litopenaeus vannamei.
Links
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Statistics
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PSSM-Id: 147854
Aligned: 8 rows
Threshold Bit Score: -1
Created: 20-Apr-2021
Updated: 29-Sep-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q6V4W4    1 MRLVVCLVFLASFALVCQGQGYKGGYTGPVVRPfvrpigRPFvt-piG-RPVVSG-NVCpLSCRGITTLQARSCCSRLGR 77  blue shrimp
Q4KXB8    1 MRLVVCLVFLASFALVCRGQGYKSGHTGPYPRPly--gsRPI-----GiRPITRPdPSC-AGCRILTLDDAIACCRRLGR 72  Penaeus chinensis
Q962A9    1 MRLVVCLVFLASFALVCQGGAQRGGFTGPIPRP------PPH-----G-RP--PLgPIC-NACYRLSFSDVRICCNFLGK 65  white shrimp
Q3HNH4    1 MRLVVCLVFLASFALVCQGH--SSGYTRPLPKPsrpifiRPI-----G----------C-DVCYGIPSSTARLCCFRYGD 62  Pacific white shrimp
ABO93321  1 MRLVVCLVFLASFALVCQGHGYKSGYTRPFSRP-------PF-----G-GIYRPVrPVC-NACYRLSYSDALNCCTRFGS 66  southern brown shrimp
Q6H2Z5    1 MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRP-------PY-----G-GGYHPV-PVC-TSCHRLSPLQARACCRQLGR 65  black tiger shrimp
ABC33920  1 MRLVVCLVFLASFALVCQGQ--KSGYTRPISRP-------PY-----G-GGYG---NVC-TSCHVLTTSQARSCCSRFGR 61  Penaeus chinensis
Q963D9    1 MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRP-------PFvrplpG-GPIGPY-NGCpVSCRGISFSQARSCCSRLGR 71  Pacific white shrimp
Q4KXB8    1 MRLVVCLVFLASFALVCRGQGYKSGHTGPYPRPly--gsRPI-----GiRPITRPdPSC-AGCRILTLDDAIACCRRLGR 72  Penaeus chinensis
Q962A9    1 MRLVVCLVFLASFALVCQGGAQRGGFTGPIPRP------PPH-----G-RP--PLgPIC-NACYRLSFSDVRICCNFLGK 65  white shrimp
Q3HNH4    1 MRLVVCLVFLASFALVCQGH--SSGYTRPLPKPsrpifiRPI-----G----------C-DVCYGIPSSTARLCCFRYGD 62  Pacific white shrimp
ABO93321  1 MRLVVCLVFLASFALVCQGHGYKSGYTRPFSRP-------PF-----G-GIYRPVrPVC-NACYRLSYSDALNCCTRFGS 66  southern brown shrimp
Q6H2Z5    1 MRLVVCLVFLASFALVCQAQGYQGGYTRPFPRP-------PY-----G-GGYHPV-PVC-TSCHRLSPLQARACCRQLGR 65  black tiger shrimp
ABC33920  1 MRLVVCLVFLASFALVCQGQ--KSGYTRPISRP-------PY-----G-GGYG---NVC-TSCHVLTTSQARSCCSRFGR 61  Penaeus chinensis
Q963D9    1 MRLVVCLVFLASFALVCQGQVYKGGYTRPVPRP-------PFvrplpG-GPIGPY-NGCpVSCRGISFSQARSCCSRLGR 71  Pacific white shrimp

Q6V4W4   78 CCREAKG 84  blue shrimp
Q4KXB8   73 CCSALKG 79  Penaeus chinensis
Q962A9   66 CCHLVKG 72  white shrimp
Q3HNH4   63 CCH--RG 67  Pacific white shrimp
ABO93321 67 CCHIRKG 73  southern brown shrimp
Q6H2Z5   66 CCDAKQT 72  black tiger shrimp
ABC33920 62 CCVPRRG 68  Penaeus chinensis
Q963D9   72 CCHVGKG 78  Pacific white shrimp
Q4KXB8   73 CCSALKG 79  Penaeus chinensis
Q962A9   66 CCHLVKG 72  white shrimp
Q3HNH4   63 CCH--RG 67  Pacific white shrimp
ABO93321 67 CCHIRKG 73  southern brown shrimp
Q6H2Z5   66 CCDAKQT 72  black tiger shrimp
ABC33920 62 CCVPRRG 68  Penaeus chinensis
Q963D9   72 CCHVGKG 78  Pacific white shrimp
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