3EBQ


Conserved Protein Domain Family
Peptidase_C97

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pfam05903: Peptidase_C97 (This model is not part of the current CDD release)
PPPDE putative peptidase domain
The PPPDE superfamily (after Permuted Papain fold Peptidases of DsRNA viruses and Eukaryotes), consists of predicted thiol peptidases with a circularly permuted papain-like fold. The inference of the likely DUB function of the PPPDE superfamily proteins is based on the fusions of the catalytic domain to Ub-binding PUG (PUB)/UBA domains and a novel alpha-helical Ub-associated domain (the PUL domain, after PLAP, Ufd3p and Lub1p).
Statistics
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PSSM-Id: 517022
Aligned: 29 rows
Threshold Bit Score: 83.1194
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3EBQ_A      9 YPVKLYVYDLS---KGLARRL-------------SPIMLGKQLEGI--WHTSIV-------VHKDEFFFg---------- 53   human
O56042   1040 HSYATISYDYVlpkTGGNRRVlcfagvgdpnpynLP--TGDKNVGIgsYMVEFD-------IIGLDKDTgvkvmrpvpwk 1110 Rice ragged stunt...
Q9VWH2     27 EPVMLNIYDLStsnN-------------------YTFPLGL---GV--FHSGVQ-------LYGREYAFlaln-----ls 70   fruit fly
BAD72532   44 SPVYLNVYDVTpanG-------------------YARWLGL---GV--YHSGVQgmyallsSPSILYAYgahd-----ga 94  
Q5Z918     25 YTVVLNVYDLTplnN-------------------YLHWCGL---GI--FHSAVE-------VHGSEYSFgahd-----hp 68   Japanese rice
Q6H6I0     10 TPVLLNVYDLTpanD-------------------YLYWLGF---GV--FHSGIE-------VHGMEYGFgahd-----fp 53   Japanese rice
Q93VG8     26 TPVYLNVYDLTpvnN-------------------YLYWFGI---GI--FHSGIE-------AHNLEYCYgahe-----yp 69   thale cress
O49393     17 VPVYLNVYDLTpmnV-------------------YGYWLGI---GI--YHSGLE-------VHGVEYGYgahe-----ks 60   thale cress
Q6NQ19     18 VPVYLNVYDLTpinG-------------------YAYWLGL---GI--YHSGVE-------VHGVEYGFgahd-----hs 61   thale cress
Q8LA90     15 VPVYLNVYDLTpinG-------------------YAYWLGL---GV--YHSGVE-------VHGIEYAYgahe-----yp 58   thale cress
3EBQ_A     54 sGGIS------------------SCPPGGt----LLG-PPDSVV-----DVGSTEVTEEIFLEYLSSLGESlFRGEAYNL 105  human
O56042   1111 qCGYTeeqvwsiyktlgkeyrkvELKPYTvedawRVIaKSSHKRvlsdkAIISTPISYERQRAIEYMLSS---HGFDYNL 1187 Rice ragged stunt...
Q9VWH2     71 iSGIF------------------EIHPCNgqeelGEHfRFRKSI-----LLGYTDFTCAEVKRVINLLGFE-FRGTSYHL 126  fruit fly
BAD72532   95 gSGIF------------------EVAPRR-----CPGyAFREAI-----LVGTTELTRAEVRAVMADLAAD-FPGDAYNL 145 
Q5Z918     69 tSGVF------------------EVEPKC-----CPGfMYRCSI-----FIGRTSLNPLEFRDFIQRMASE-YHGDTYHL 119  Japanese rice
Q6H6I0     54 sSGVF------------------EVESKS-----CPGfIYRKTV-----WLGTTDMSHGEYRSFIEKLAGK-YHGNSYHL 104  Japanese rice
Q93VG8     70 tSGVY------------------EVEPRN-----CPGfIFRRSV-----LLGTTSMSRSDFRSYMEKLSRK-YHGDTYHL 120  thale cress
O49393     61 sSGIF------------------EVEPKK-----CPGfTFRKSI-----LVGETEMKAKEVRSFMEKLSEE-YQGNKYHL 111  thale cress
Q6NQ19     62 tTGIF------------------EVEPKQ-----CPGfTFRKSI-----LIGRTDLDPENVRVFMEKLAEE-YSGNSYHL 112  thale cress
Q8LA90     59 sTGIF------------------EGEPKQ-----CEGfTFRKSI-----LIGKTDLGPLEVRATMEQLADN-YKGSSYNL 109  thale cress
3EBQ_A    106 FEHNCNTFSNEVAQFLTGRKIPSYITDLPSEVLSTPFgqalRPLLD 151  human
O56042   1188 VLNNCQDFTRGLFDYARGGPVPDFIENDVRIAMIHSTsr---hfAE 1230 Rice ragged stunt virus (isolate Thailand)
Q9VWH2    127 TSKNCNHFSNCLAHLVCGRKIPRWVNRLAYLITCVPFlerfV---V 169  fruit fly
BAD72532  146 VSRNCNHFCDAACRRLVRARIPRWVNRLAKIGV---VftcvIPGNG 188 
Q5Z918    120 ISKNCNHFTDDLSTRLTGKPIPGWVNRPAKLGA---FcnclLPESM 162  Japanese rice
Q6H6I0    105 VSKNCNHFTDDVCKNLTGKPIPSWVNRLARVGS---FfdclLPESV 147  Japanese rice
Q93VG8    121 IAKNCNHFTEEVCLQLTGKPIPGWINRLARVGS---FcnclLPESI 163  thale cress
O49393    112 ITRNCNHFCNHVSLKLTHKSIPSWVNRLARLGF---LcncvLPACL 154  thale cress
Q6NQ19    113 ITKNCNHFCNDVCVQLTRRSIPSWVNRLARFGL---FcncvLPAEL 155  thale cress
Q8LA90    110 ITKNCNHFCDETCIKLTGNPIPSWVNRLARIGF---McncvLPATI 152  thale cress
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