Conserved Protein Domain Family
4_1_CTD

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pfam05902: 4_1_CTD (This model is not part of the current CDD release)
4.1 protein C-terminal domain (CTD)
At the C-terminus of all known 4.1 proteins is a sequence domain unique to these proteins, known as the C-terminal domain (CTD). Mammalian CTDs are associated with a growing number of protein-protein interactions, although such activities have yet to be associated with invertebrate CTDs. Mammalian CTDs are generally defined by sequence alignment as encoded by exons 18-21. Comparison of known vertebrate 4.1 proteins with invertebrate 4.1 proteins indicates that mammalian 4.1 exon 19 represents a vertebrate adaptation that extends the sequence of the CTD with a Ser/Thr-rich sequence. The CTD was first described as a 22/24-kDa domain by chymotryptic digestion of erythrocyte 4.1 (4.1R). CTD is thought to represent an independent folding structure which has gained function since the divergence of vertebrates from invertebrates.
Statistics
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PSSM-Id: 517021
Aligned: 8 rows
Threshold Bit Score: 125.813
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELV12560      712 KDVPLVHTETRTITYEAAqT----------DDRsGDLDPGVLLTAQTITSETTSSTTTTQITKTVKGGISETRIEKRIVI 781 
XP_014342933  678 SRKEAVTTSHTAITETRS-V----------SPVtNSSGKQTATNVQAVAAETISTSTTTHVTKTAKGGYSETRIEKRIII 746 
NP_001337249  420 kevpivqtetktityespqI----------DGG-AGGDSGTLLTAQTITSESVSTTTTTHITKTVKGGISETRIEKRIVI 488  human
XP_058163416  995 KEVPIVQTETKTITYESPqI----------DGG-AAGDSGTLLTAQTITAESVSTTTTTHITKTVKGGISETRIEKRIVI 1063 nine-banded a...
XP_026689968  787 tQPPIVQTETKTITYESStVrsqnepaqaeSSR-TDEHQSELVSSQIISSETEYTVTTTEITKIVHGSVSETVMEKQVVS 865  vase tunicate
XP_036016205  639 KEVPVVHTETKTITYESSqV----------DPG-ADLEPGVLMSAQTITSETTSTTTTTHITKTVKGGISETRIEKRIVI 707  house mouse
NP_001159479  490 KDVPIVHTETKTITYEAAqT----------DDNsGDLDPGVLLTAQTITSETPSSTTTTQITKTVKGGISETRIEKRIVI 559  human
XP_029704986  688 KEVPIVHTETKTITYEAAqL----------DGN-GDGEPGVLMTAQTITSESLCTTTTTHITKTLKGGLSETRIEKRIVI 756  torafugu
ELV12560      782 TGDAD-VDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETD 819 
XP_014342933  747 TGDED-VDQDQALALAIKEAKQQHPDMLVTKAVVYKEPM 784 
NP_001337249  489 TGDGD-IDHDQALAQAIREAREQHPDMSVTRVVVHKETE 526  human
XP_058163416 1064 TGDAD-IDHDQALAQAIREAREQHPDMSVTRVVVHKete 1101 nine-banded armadillo
XP_026689968  866 TGDASvDDHHKAMADMIRDA-QLNPNLSITKVVVHEERP 903  vase tunicate
XP_036016205  708 TGDAD-IDHDQALAQAIKEAKEQHPDMSVTKVVVHKETE 745  house mouse
NP_001159479  560 TGDAD-IDHDQVLVQAIKEAKEQHPDMSVTKVVVHQETE 597  human
XP_029704986  757 TGDCD-IDHDEALAQAIKEAKEQHPDMSVTRVVVHKETE 794  torafugu
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