1Q8R


Conserved Protein Domain Family
RusA

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pfam05866: RusA 
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Endodeoxyribonuclease RusA
This family consists of several bacterial and phage Holliday junction resolvase (RusA) like proteins. The RusA protein of Escherichia coli is an endonuclease that can resolve Holliday intermediates and correct the defects in genetic recombination and DNA repair associated with inactivation of RuvAB or RuvC.
Statistics
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PSSM-Id: 399102
Aligned: 74 rows
Threshold Bit Score: 59.5993
Threshold Setting Gi: 524088042
Created: 21-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1Q8R_A         10 WPP--SNNRYYRH-----NRGr--------tHVSAE-----GQAYRDNVARIIKNAMl---DIGLA-------MPVK-IR 58  Escherichia coli
WP_015151833  213 GSVtpKARPRVTS-----NGT----------FLPKR-----YREWRLRAEGEIIMQVnq-mNPLPQ-------LPIErAS 264 Oscillatoria a...
Q119T1        153 GKIvpKARPRVTA-----NGT----------YLPSR-----YRIWRNQAEVEIYRQVsk-lNLEVS-------LPIQrAA 204 Trichodesmium ...
BAI89716      160 gAVvpKARPRVTS-----NGT----------YLPPR-----YREWRNRAEVELYRQIse-rNLTNR-------FPIRrAA 211 Arthrospira pl...
CBH21219        8 GRPisKSNFKLSN-----KSGq--------aWLPHKgkyskYAAYENYIAGIINQEYf---GPPLE-------ENLI-TI 63  [Clostridium] ...
WP_007286418    8 GRPisKSNFKLHN-----IHGq--------aWMPAKgkhskYLAYENMIAGYINQQYq---GEQIE-------EDLI-TV 63  Intestinibacte...
jgi:Amet_3638   8 GRPvsKSNFKLTH-----KNGq--------vWMPKSgkhsrYVAYENMIAGYINQQYa---GPQLT-------QQLI-TI 63  Alkaliphilus m...
WP_012810834    8 LPP--SVNHAYRTyvhpqTGQri-------rVLTSK-----AQKFRRDAAYLALRWRqetgWTMPQ-------PGTK-VV 65  Alicyclobacill...
jgi:Haur_4640   9 LPP--SINSQYVT-----VGNr--------rVLSRE-----AQAFKRQVKRQLALLQqr-dTISEQflalahqGYIA-LF 66  Herpetosiphon ...
CCY68617        9 ipP--SVNHYLGY-----RAIikdgkplavsYVTPE-----TIRYKSKLREYIAEEVek-qHWTLKpn---ktQHFY-VD 71  Clostridium sp...
1Q8R_A         59 IECHMPD--RRRRDLDNLQKaAFDALt--KAGFWLDDAQ-VVDYRV-Vkm-----pVTKGG---RLELTIT 115 Escherichia coli
WP_015151833  265 VRIILRGkhR--GDGDNAIGsVCDALv--GAGIFSADSL--------KqipfgswrHIPDGe-tGVKIQIE 322 Oscillatoria acuminata
Q119T1        205 ISISFCGkhRTNSDLDNLAGaCLDALtlnGAGVLQDDRL--------ScipklnieYIPHIkkiGVWIEIK 267 Trichodesmium erythraeu...
BAI89716      212 VTIRLFGnhRTNSDIDNLAGaCLDALtlqGAGVLMDDRL--------SclpqlrveFIPDLpktGVWIDIE 274 Arthrospira platensis N...
CBH21219       64 LKLYFPN--KRMGDIHNYPKsICDGIe--KSGIILNDKQ-LKPFLIl---------DYIDKdnpRVEIELY 120 [Clostridium] sticklandii
WP_007286418   64 LKLYFPD--KRMGDLHNYPKsICDGIe--KSGIIKNDKQ-LKPVLLf---------NYIDKeepRVEIFLY 120 Intestinibacter bartlettii
jgi:Amet_3638  64 LRLYFPD--RRMGDLHNYPKsICDGIe--KSGIISNDKQ-LRPVLLf---------DFIDSenpRVEIELY 120 Alkaliphilus metallired...
WP_012810834   66 LRLWYFWpsRRRMDTHNREKvLLDAL---EGVLYPEDRWvLIQEMD----------FEVDRkrpRLEIEVl 123 Alicyclobacillus acidoc...
jgi:Haur_4640  67 LDFYFETp--lRRDLDGGLKiTQDSI---CTSLGINDNR-VVDIHLvK--------RIDPLh-pRLEVELE 122 Herpetosiphon aurantiac...
CCY68617       72 TVFYFDRv---dRDSNNYFKvLLDAIt-eTKLIWMDDNVaLERVNR----------IYYDAknpRIELTIR 128 Clostridium sp. CAG:678
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