4RT6,1RWR


Conserved Protein Domain Family
Haemagg_act

?
pfam05860: Haemagg_act 
Click on image for an interactive view with Cn3D
haemagglutination activity domain
This domain is suggested to be a carbohydrate- dependent haemagglutination activity site. It is found in a range of haemagglutinins and haemolysins.
Statistics
?
PSSM-Id: 399100
Aligned: 43 rows
Threshold Bit Score: 77.2975
Threshold Setting Gi: 81500285
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4RT6_A    4 DLPQGSSVVVGEANVS-T--IGNKMTIDQKTPTTQIDWHSFDIGQNKEVEFK--QPDANSVAYNRVTGGNASQIQGKLT- 77   Haemophilus influen...
Q8YM30   31 VTSDGTTNTIVNP--SgNnfHILDGI--EKGNNLFHSFSNFSVPTGGSATFDvtNTPNITTIFSRVTGGNISQIDGLIQt 106  Nostoc sp. PCC 7120
Q8YM29   28 VTSDGTTNTTVNP--SsNnfQIINGT--ARGNNLFHSFSNFSLPKDTSATFDltNTPNITNIFSRVTGGNISHIDGLIEt 103  Nostoc sp. PCC 7120
Q8YM31   28 VTPDNTLNTSVS---GsNhySITNGT--RVGNNLFHSFSQFSIPNNGSALFD--NASDVQNIFSRVTGGHVSTINGSINa 100  Nostoc sp. PCC 7120
Q8YM34   28 VIPDPTLNTTVT---GsNhfTITNGS--RVGNNLFHSFSQFSFPINGSAFFN--NAADIQNIFSRVTGGTVSNIDGLIRa 100  Nostoc sp. PCC 7120
Q8YM35   28 VTSDNTLGTV-----VdSnySITNGI--QVGNNLFHSFSQFSIPPGSSVSFD--NATDIQNIFSRVTGGNISHIDGEISa 98   Nostoc sp. PCC 7120
Q8YKQ8   30 INADNSSQNNSAVNVQgNtiFIEGGT--QLGGNLFHSFKDFSINYGDTAYFN--NASIIQNIISRVTGNSISNINGTIRn 105  Nostoc sp. PCC 7120
Q8YXM8   31 LNPDNTLPTNVNNI-GgGvyDITGGARPNNGANLFHSFQDFAIRSGDTARFI--YDTGINNIITRVTGGSPSQINGTIQt 107  Nostoc sp. PCC 7120
Q8YX21   37 LGSEASILNQGVSVKGaIgdIIDGGA--VRGTKLFHSFQEFSIGEGQRVYFS--NPAGIKNILTRVTGNNRSDILGTLGv 112  Nostoc sp. PCC 7120
Q8YZU0   31 VTADQTLGTQVVDI-NlNsfILGGAT--VDNTNLFHSFGSFNVPSGGAAIFI--NDPSLTNIFARVTGGTASDIQGRIGt 105  Nostoc sp. PCC 7120
4RT6_A   78 --------ANGKVYLANPNGVIITQGAEINVAGLFATTKDLERIS 114  Haemophilus influenzae Rd KW20
Q8YM30  107 lg----gnHQVSLFLMNPNGIMFGQNAKLDIGGSFVGTTANSIKF 147  Nostoc sp. PCC 7120
Q8YM29  104 ik----snNPVSLFLMNPAGIVFGSNASLNIGGSFVGTTANSLKF 144  Nostoc sp. PCC 7120
Q8YM31  101 -------kGSANVFLINPNGIIFGANARLNIGGSFVGTTANSIQF 138  Nostoc sp. PCC 7120
Q8YM34  101 -------nGSANLFLLNPSGIIFGKNASLKIGGSFVATTAESIKF 138  Nostoc sp. PCC 7120
Q8YM35   99 -------kGNANLFLINPAGIIFGKNTSLSIGGSFVATTANTIKF 136  Nostoc sp. PCC 7120
Q8YKQ8  106 -------nGQANLFILNPNGFFFGNSARLNIGGSFLATTANSIKF 143  Nostoc sp. PCC 7120
Q8YXM8  108 llngtnniGNANLFLINPYGIIFGANAKLDIGGSFIGTTADSIKF 152  Nostoc sp. PCC 7120
Q8YX21  113 -------lGNANLFLINPNGIVFGQNARLDIAGSFVASTVDSLTL 150  Nostoc sp. PCC 7120
Q8YZU0  106 -------qGTANLYLINPNGIIFGTSARLNIGGSFVATTANAIQF 143  Nostoc sp. PCC 7120
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap