Conserved Protein Domain Family
VP2_lagovir

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pfam05801: VP2_lagovir 
Lagovirus minor capsid protein VP2
This entry includes minor capsid protein VP2 from Rabbit hemorrhagic disease virus and related lagoviruses. VP2 is minor structural protein that forms a portal-like structure at a unique three-fold axis of symmetry, following binding to the host receptor. The channel formed by VP2 may allow the delivery of the viral genome through the host endosomal membrane.
Statistics
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PSSM-Id: 487973
Aligned: 2 rows
Threshold Bit Score: 204.603
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P27412   5 MSEFIGLGLAGAGVLSNALLRRQELQLQKQAMENGLVLKADQLGRLGFNPNEVKNVIVGNSFSSNVRLSNMHNDASVVNA 84  Rabbit hemorrhagic di...
P27412   5 MSEFIGLGLAGAGVLSNALLRRQELQLQKQAMENGLVLKADQLGRLGFNPNEVKNVIVGNSFSSNVRLSNMHNDASVVNA 84  Rabbit hemorrhagic di...
P27412  85 YNVYNPASNGIRKKIKSLNNSVKIYNTTGESSV 117 Rabbit hemorrhagic disease virus-FRG
P27412  85 YNVYNPASNGIRKKIKSLNNSVKIYNTTGESSV 117 Rabbit hemorrhagic disease virus-FRG
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