8QYV


Conserved Protein Domain Family
YL1

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pfam05764: YL1 (This model is not part of the current CDD release)
YL1 nuclear protein
The proteins in this family are designated YL1. These proteins have been shown to be DNA-binding and may be a transcription factor.
Statistics
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PSSM-Id: 516969
Aligned: 102 rows
Threshold Bit Score: 43.8961
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8QYV_Z        21 RSRRSNAGNKLQKLLEQELR----DIEStkrqi-ssykNGND---------------DEEDEIgllFQededdedfemma 80   Saccharomyces ...
XP_067742146  23 lpsRSSRGTRITKLI---------GEEAeadasfwgqsAWQE---------------DGEDED---YS------------ 63  
Q23RD9       472 MTFRSRRGEGIKKLMELQKRnegfGDDLd--------dFWKEnkyfgkitevtkandEEEDED---FN------------ 528  Tetrahymena th...
XP_018654871   7 RERRANAGARMARLLNEEE-----EDEFysn----iygGFTE---------------EEEDAD---YQ------------ 47  
XP_002055987   5 RSRRHNAGNKIAKLLDEE------EDDFykt----sygGFQD---------------EEGDKE---YV------------ 44  
8_pfamImport   1 RERRSNAGNKLAKLLNEEE-----EDDFykt----tygGFQE---------------EENDDD---YK------------ 41  
XP_030828336   7 REKRANAGSKMHRLLAEEQ-----EDEFytt----tygGFQD---------------ESGDDE---YS------------ 47  
XP_009027263  20 RDRRLNAGTRMSKLLEAED-----EDDFykt----tygGFIE---------------EADDED---YK------------ 60  
4_pfamImport   1 RESRRNAGNRMSKVLEGELD----EDEFykt----tygGFME---------------EEEDND---FS------------ 42  
NP_001258017   7 RAPRKTAGNRLSGLLEAEE-----EDEFyqt----tygGFTEes---------------gDDE---YQ------------ 47   human
8QYV_Z        81 kddddegeekedetqsirkepSQASSEQA--ADdl-----mfSSSese-dsSNENDEDAEEKEiR-RQELLSR------- 144  Saccharomyces ...
XP_067742146  64 ---------------------TEAEEEDVvdSDfd-----keEAPdde-vhDAEEDEEPTRR--KrSATSSGRykepvqp 114 
Q23RD9       529 ---------------------EEEFKDVKdvFDsdfqdtsdlEDDgdd-dsNMSDEDSDSEKKk---------------- 570  Tetrahymena th...
XP_018654871  48 ---------------------SESSVEDV--IDsdfadessgSDEddataiASDDDENKR------QKRQSNRvvtkgyk 98  
XP_002055987  45 ---------------------QKDEEEDV--VDsd-----fsIDEqdepvsDQEDAPD--------KKRKRGGvntkayk 88  
8_pfamImport  42 ---------------------SEEEGEDV--VDsd-----fsIDEndevvsDHEEDG----------KKTQKNvirkvyk 83  
XP_030828336  48 ---------------------SEESDADSs-SDsd-----idAPEddepisGSDDEG----------TKRKRRvmtksyk 90  
XP_009027263  61 ---------------------SEYSNSDA--TDsd-----idINEdddtisDDD------------IEKKEKKtfssvyk 100 
4_pfamImport  43 ---------------------SGQEDSADe-VDsd-----fdRSEndevvsDEGDADKP-------KRRKKPGvstkayk 88  
NP_001258017  48 ---------------------GDQSDTEDe-VDsd-----fdIDEgdepssDGEAE----------EPRRKRRvvtkayk 90   human
8QYV_Z       145 ----KKrnkrlqk----gpvvikkQKpkpksgeA--IPRSHH-THEQLNAE-TLL-------LNTr-----------RTS 194  Saccharomyces ...
XP_067742146 115 rpakRKa----------------------------vAPVQNSpVAAAAYAL-------------Pvfeyv--aptvrSST 151 
Q23RD9       571 ---kRNkdkpsylm--kkddvirkEQe-----kIakQRQKQKaERLKQLDTqEENeiqisqkIQKekreaqitiqleKRT 640  Tetrahymena th...
XP_018654871  99 epkrAKithpqenklsdkkansdkSLt-------------------DPQSKsAVQikdkqqqITVtkktsgqistyeRPE 159 
XP_002055987  89 epakpa------ikketkavpalhKKr---------------------------Ggg---gvVKRrvrprftvldsgRKS 132 
8_pfamImport  84 vrisLVenqislsi--ylslvilqKLk---------------------------At------KRFvynqhitiqyfkRKS 128 
XP_030828336  91 epaiKPaskpalkk--sptshiprEKk---------------------------EksttgtpSVKkrkhsskddssvRKS 141 
XP_009027263 101 eaikKFgltintkt--kvmalnhqKKt---------------------------Qmkl-nsdVLEkqqhqtklgeekKKS 150 
4_pfamImport  89 epavKKtskkdipe--tqaaesqaPKp--------------------------QDdkmeedeSNMtnadaaarrasmRKS 140 
NP_001258017  91 eplkSLrprkvntp--agssqkarEEkallplelqddgsdsrksmrqstaehtrqtflrvqerqgqsrrrkgphcerplt 168  human
8QYV_Z       195 KRSSVMEN----TMKVYEKLSKA-EKK-------RKIIQE--RIRKHKEQesq----hmLTQEERLRIAKETEKLNILSL 256  Saccharomyces ...
XP_067742146 152 ARKSSE------SSEMRRRASHE-AAK----------------LAAKHKKptvvktgnrLTQAQLLAEAVRTEVENTQSL 208 
Q23RD9       641 LRQSTNEKsllsQSQLSPRLKKKlRLNedgsvdiNGQQGEqgGQAQGAGGkkkryihdfLTQEQLLKEAVFTEFVNRKQL 720  Tetrahymena th...
XP_018654871 160 LRASTL-------QATADQEAETtRRRia---taENTAVRrkALLAEIAQrknlpevrrLTQEELLAEAKITEEINRRSL 229 
XP_002055987 133 IRTSTAIK----TQATKIRLKELdDAR-------------------KRKKkkirvedymPTQEELLEEAKITEEENIKSL 189 
8_pfamImport 129 IRKSTAVK----SAATAQRIKER-------------------TAQGKRRKivrsedvwkPTQEELLEEAKITEEENLKSL 185 
XP_030828336 142 SRRSTIQR----VNEFEIRIKER-ETK------------A--QISKQQKTkrkvpemrrLTQEELLVEAKITEKKNLHSL 202 
XP_009027263 151 IRKSTAEK----SKCTEGILKER-KAK------------A--ALNKLSGDkrkitemrrLTQEELLAEAKITEEINLASL 211 
4_pfamImport 141 SRHATAAN----SLLTSIRQKER-EIS---------------DKKKKENTkkpmigvrrLTQEELLAEAEKTERRNLKSL 200 
NP_001258017 169 qeellreakiteelnlrsletyeaapkspcs------------------------------------------------- 199  human
8QYV_Z       257 DKFKEQEVWKKe---nRLALQKrqkqkfqpnETILQFLS 292  Saccharomyces cerevisiae S288C
XP_067742146 209 QRLEQLEEEKKaesiaPKAPFT---------GSMVRYYS 238 
Q23RD9       721 EDLLRLEEEKKqfslsKKFIDE---------GPKIIYkn 750  Tetrahymena thermophila SB210
XP_018654871 230 ARYQRLEIEKKkariqKT-VNS---------TPMIRYHS 258 
XP_002055987 190 EKFQKMELEKKktrptKR-VFT---------GPTIRYHS 218 
8_pfamImport 186 EKYYKLELEKKksrvvKK-TFT---------GPVVRYYS 214 
XP_030828336 203 YLFQQLQEEKKktkvfKKAFM----------GPFIRFHS 231 
XP_009027263 212 ETYQKMELEKKklrthRNNCM----------GSAIKFHS 240 
4_pfamImport 201 ENYQRLEANRKksqvkKR-SFT---------VPTIKTYS 229 
NP_001258017     ---------------------------------------      human
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