3IPD


Conserved Protein Domain Family
SNARE
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pfam05739: SNARE (This model is not part of the current CDD release)
SNARE domain
Most if not all vesicular membrane fusion events in eukaryotic cells are believed to be mediated by a conserved fusion machinery, the SNARE [soluble N-ethylmaleimide-sensitive factor (NSF) attachment protein (SNAP) receptors] machinery. The SNARE domain is thought to act as a protein-protein interaction module in the assembly of a SNARE protein complex. It is composed of about 70 amino acids arranged in an alpha-helical structure.
Links
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Statistics
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PSSM-Id: 516956
Aligned: 64 rows
Threshold Bit Score: 30.0775
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
3IPD_B        49 EMIDRIEYNVEHAVDYVERAVSDTKKAVKYQSKARRKKIMIIICCVILGIII 100 Norway rat
O43752       199 VMLEDFSHELESTQSRLDNVMKKLAKVSHMTSDRRQWCAIAILFAVLLVVLI 250 human
O60499       193 IMLDAFAQEMDHTQSRMDGVLRKLAKVSHMTSDRRQWCAIAVLVGVLLLVLI 244 human
Q9HGN3       169 DLLDTLDNSIETTNSKLRRGMKRLKDFTIASADSKSGCCITVLIIILIALLV 220 Schizosaccharomyces pombe 972h-
Q8S4W5       170 RMLDELDQDVDTTHSRLKAAQKKMQELIRKSGSNTQLVLIVVLIVILVLLAT 221 Chlamydomonas reinhardtii
Q946Y7       189 RIIDELDTEMDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLLVLFIILFV 240 thale cress
O14222       195 VLLDNMNNDADRIERRFDHAKNRLNKVSRKAKQYPRCFIILLLCALLLLVAS 246 Schizosaccharomyces pombe 972h-
XP_002902009  68 KMLDDLTDDVDEAQERMNFVMGRLSKLLKTKDKCQLGLILFLVAVLVVMIFL 119
Q94KK7       173 RLIDDLDYDVDITDSRLRRVQKSLALMNKSMKSGCSCMSMLLSVLGIVGLAL 224 thale cress
Q9VV76       180 NILDNLANAMDRVETGVQRETQSIGQVNRRDSTWGYWLVIIALFVAIIVVVF 231 fruit fly
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