Conserved Protein Domain Family
TnpB_IS66

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pfam05717: TnpB_IS66 
IS66 Orf2 like protein
This protein is found in insertion sequences related to IS66. The function of these proteins is uncertain, but they are probably essential for transposition.
Statistics
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PSSM-Id: 487929
Aligned: 120 rows
Threshold Bit Score: 100.258
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAL94646         2 YSEAVDMRKSIDALAQLVASCMGMDP-LSGQVFVFIGRRRDKVKLLVWDRHGFWVLYKRLERGRFADPArlaAGALaMSE 80 
CAS:pLAtcm_206  14 YTPPADMRKSFDGLSALVRQKLAEDP-ASGQLFVFINRRRTQLKVLYFEQGGYCLWSKRLEAGRFHVDG---QGGD-RRM 88 
WP_015279037    13 HGRPVDMRKSFTGLIALTQQALAQDP-LSGHLFVFVNRRGDYLKVLYWDRSGFCLWCKRLERGRFISDW---RKRQ-DQE 87  Thioflavicocc...
WP_012584334    13 YGRPVDMRKSFDGLYALTRQALGCDP-LSGELFVFINRRGTQMKVLYWDRTGFCVWAKRLEQGRFVSNW---AQVR-TRQ 87  Thauera amino...
Q5P881          13 YGRPVDMRKSFDGLYALARHGVGQDP-LSGHLFVFINRRATQMKVLYWDRSGFCIWAKRLESGRFVSDW---SRAT-SRE 87  Aromatoleum a...
jgi:Psta_3695   16 ATAPVDMRKSFDGLAEIVRAFLGQDP-LSGHLFVFRNKSSQRLKILWWDRGGLTIYYKRLERGVFRFPStkdS----ALA 90 
WP_013924674    13 CQHPVSMRKSFEGLSALVEQLFPEEL-LSGVWFVFLNRRKDHMKVLSWDGDGLVIWFKRLEKGTFSYSW------GsVDQ 85  Parachlamydia...
WP_015249437    13 HADSVDLRKSFDGLSGIVSQAFPQEElLSGHLFLFLNRRRDRIKILYWNVDGLAIWYYRLEAGSFQVPLr-pSSDA-PIE 90  Singulisphaer...
WP_012234915    13 AAEPTDLRKSFDGLSALVSQRFGADP-LCGHLFVFRNRRGDQVRVLFWDRTGYMIVAKKLARGRFHLARdlpKGAT-HVE 90  Sorangium cel...
CDE87697        13 YTQGIDMRKGAESLFGIVRNN-SMDP-LSGSVFLFANKSRSLLKLLHWEQGGFVIYYKRLESGRVSPTLfkgSDVS-FKE 89 
CAL94646        81 LAMSELVAWLDGIDLARVRR 100
CAS:pLAtcm_206  89 LSWTELKLIIEGIDLSSLRR 108
WP_015279037    88 LDVTGLRLLLEGIEPARRRl 107 Thioflavicoccus mobilis
WP_012584334    88 MDWTGLKLLLEGIEPIRYKR 107 Thauera aminoaromatica
Q5P881          88 MDWTGLKLLLEGIEPARFKK 107 Aromatoleum aromaticum EbN1
jgi:Psta_3695   91 VDSSQLLRLLDGLEVVARra 110
WP_013924674    86 MDRKTFLMLLEGVIPKKVQA 105 Parachlamydia acanthamoebae
WP_015249437    91 LRSAQLAMLLGGIDLGNAQQ 110 Singulisphaera acidiphila
WP_012234915    91 VEAAELSLMLEGFDLSEAVR 110 Sorangium cellulosum
CDE87697        90 MRWDEIVMLMEGINLSSKRR 109
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