6DWW


Conserved Protein Domain Family
Dimer_Tnp_hAT

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pfam05699: Dimer_Tnp_hAT 
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hAT family C-terminal dimerization region
This dimerization region is found at the C-terminus of the transposases of elements belonging to the Activator superfamily (hAT element superfamily). The isolated dimerization region forms extremely stable dimers in vitro.
Statistics
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PSSM-Id: 399013
Aligned: 47 rows
Threshold Bit Score: 61.8937
Threshold Setting Gi: 75154079
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6DWW_A 428 EFEFYRKEiVILSED---------FKVMEWWN---LNSKKYPKLSKLALSLLSIPASSAASERTFSLA--GNIITEKRNR 493 house fly
O43422 634 NPDTLSAElHCWRIKwkhrgkdieLPSTIYEAlhlPDIKFFPNVYALLKVLCILPVMKVENERYENGRkrLKAYLRNTLT 713 human
Q8S7P4 693 LEMQLGTFiDDMRRDerfkgletlAELSIKLVe-tNKHVLYDWVYLLLKLVLILPVATASVERVFSALsvVKSKLRNSMC 771 Japanese rice
Q9D102 246 FYRQYAGFnFIAEDgsl-----sfIDLGSLFIq-hALHNNIPCITKLLHIALSWPITSANNEKSFSTLshLKTYLLRTMG 319 house mouse
Q9H5R2 342 FYRHYAKLnFVIDDsci-----nfVSLGCLFIq-hGLHSNIPCLSKLLYIALSWPITSASTENSFSTLprLKTYLCNTMG 415 human
O82185  59 LASDLFYElKILRealp---kevrRPIEVLDFl-qKVEGCYPNSWIAYQVLLTIPVSVASAERSFSKLklIKSYLRSSMS 134 thale cress
Q9LSK4 514 DGEDLFMElKLLK-DvlpkeitkpVEVLDFLK---RMDGCYPNTWITYRILLTIPVSIASAERTFPKLklIKNYLRSTVP 589 thale cress
Q9SN25 612 DGNHLFLElKVLK-EllpteitkaIEVLNFLK---KFEGCYPNTWIAFRVMLTVPVSVASAERSFSKLklIKSYSRSTMS 687 thale cress
Q9SKI5 466 DGADLFMElKVLR-EvlpnevtkpIKVLDFLK---RVEGCYPNTWISFRILLTILVSVASAERSFSKLklIKNYLRSTMS 541 thale cress
Q9ZWT4 691 QLRVQLEHfEHVQQLpdfrtlesiSDLCRWLVk-tRKSNIYPLVFRVVTLVLTLPVSTATTERSFSAMniVKTTLRNKME 769 common morning-glory
6DWW_A 494 IGQQTVDSLLFLNSFY 509 house fly
O43422 714 DQRSSNLALLNINFDI 729 human
Q8S7P4 772 DKLLNDCLITFIERDV 787 Japanese rice
Q9D102 320 QEKLSSLALIAVEQEL 335 house mouse
Q9H5R2 416 QEKLTGPALMAVEQEL 431 human
O82185 135 QERLSDLAILSIERAL 150 thale cress
Q9LSK4 590 QERLNGLALISIEQEL 605 thale cress
Q9SN25 688 EERLNALAILSIERDL 703 thale cress
Q9SKI5 542 QDRLNGLAILSIERAM 557 thale cress
Q9ZWT4 770 DEFLSDCLLVYIEKQI 785 common morning-glory
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