8XKU


Conserved Protein Domain Family
Ycf2

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pfam05695: Ycf2 (This model is not part of the current CDD release)
Ycf2 family
This entry, previously known as DUF825, represents Ycf2 protein from Arabidopsis thaliana and related plant proteins. Ycf2 is a component of the Ycf2-FtsHi complex which has been identified as chloroplast import motor. The Ycf2-FtsHi complex is composed of six distinct components. This heterohexameric assembly is organized in a counterclockwise order with components arranged as Ycf2, FtsHi5, FtsHi1, FtsHi2, FtsHi4, and FtsH12. A collaborative interplay between the Ycf2-FtsHi complex and the TIC (translocon at the inner chloroplast membrane) complex, contributes to the efficient translocation of preproteins into the chloroplasts.
Statistics
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PSSM-Id: 516931
Aligned: 4 rows
Threshold Bit Score: 3041.5
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
8XKU_D    1 MKGHQFKSWIFELREIVREIKNAHYFLDSWTQFNSVGSFIHIFFHQERFRKLLDPRIFSILLLRNSQGSTSNRYFTIKGV 80   thale cress
Q2PMM5    1 MKGHQFKSWIFELREILREIKNSRYFLDSWTQFNSAGFFIHIFFHQESFIKLLDSRIWSILLSRNSQGSTSNRYFTIKYV 80   soybean
P61241    1 MKGHQLKSWIFELREILREIKNSHYFLDSWTKLNLVGSFTHIFFHQERFMKLFDPRIWSILLSCDSQSSTSNRYFTIKGV 80   Amborella trichopoda
Q0ZIV6    1 MKGHQFKSWIFELREILREIKNSHYFLDSWTQFTSVGSFIHIFFHQERFIKLFDPRIWSILLSRNSQGSTSNRYFTIKGV 80   wine grape
8XKU_D   81 VLFVVAALLYRINNRNMVESKNLYLKGLLPIPMNSIGPRNDTSEESFGSCNINRLIVSLLYLTKGKKISESCFRDPKEST 160  thale cress
Q2PMM5   81 VLFVVAVLIYRINNRKMVERKNPYLTRLLTIPMNSIGPKNDTLEESSESSNINRLIVPLLYLPKGKKISESYFLDPKEST 160  soybean
P61241   81 VLLVVAVLIYRINNRNMVERKNLYLMRLLPIPMNSIGPRNDTLEESFLSSNINRLIVSLLYLPKGKKISESCFMDPKEST 160  Amborella trichopoda
Q0ZIV6   81 VLFVVAVLIYRINNRNMVERKNLYLTGLLPIPMNSIGPRNDTLEESFGSSNINRLIVSLLYLPKGKKISESCFLDPKEST 160  wine grape
8XKU_D  161 WVLPITQKCIMPESNWSSRWWRNWIGKKRGFCCKISNETVAGIDISFKEKDIKYLEFLFVYY--MDDPIRKGHDWELFDR 238  thale cress
Q2PMM5  161 RVLPITKKYIMPESNWGSRWWRNWIGKKSDSSCKISNETIAGIEISFKEKDIKYLEFLFVYY--MDDPIRKDHDWEFFDR 238  soybean
P61241  161 WLLPITKKCIMPESNWGSRWWRNRIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVSYtdTDDPIRKDHDLELFDR 240  Amborella trichopoda
Q0ZIV6  161 WVLPITKKCIMPESNWGSRWWRNWIGKKRDSSCKISNETVAGIEISFKEKDIKYLEFLFVYY--MDDPIHKDHDWELFDR 238  wine grape
8XKU_D  239 LSPSKRRNIINLNSGQLFEILVKDWICYLMFAFREKIPIEVEGFCKQQGAGSTIQSNDIEHVSHLFS--RNKWAISLQNC 316  thale cress
Q2PMM5  239 LSPRKRRNIINLNSGQLFEILVKDWIYYLMFAFREKIPKEVEGFFKQQGTGSIIQSNDIEHVSHLFL--RNKRAISLQNC 316  soybean
P61241  241 LSPGKKQNIINLNSGQLFEILVKHLICYLMSAFREKRPIEVEGFFKQQGAEATIQSNDIEHVPRLFSgnKNKWGISLQNC 320  Amborella trichopoda
Q0ZIV6  239 LSPRKRRNIINLNSGQLFEILVKHWICYLMSAFREKIPIEVEGFFKQQGAGSTIQSNDIEHVSHLFS--RNKWAISLQNC 316  wine grape
8XKU_D  317 AQFHMWQFHQDLFVSWGKNPHESDFFR-KISRENWIWLDNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLNG 395  thale cress
Q2PMM5  317 AQFHMWQFRQDLFVSWGKSPHESDFLRnNMSRENWIWLDNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFIQVTGSSQLKG 396  soybean
P61241  321 AQFHMWQFHQDLFVSWGKNQHESDFLR-NVSRENLIWLGSMWLVNKDRFFSKVRNVSSNIQYDSTRSIFVKVTDSSQLKG 399  Amborella trichopoda
Q0ZIV6  317 AQFHMWQFRQDLFVSWGKNPHESDFLR-NVSRENWIWLDNVWLVNKDRFFSKVRNVSSNIQYDSTRSSFVQVTDSSQLKG 395  wine grape
8XKU_D  396 SSDQFIDPFDSISNEDSEyhYHTLINQREIQQLKERSIL-LDPSFIQTEGREIESDRFPKYLSGY--SSMPRLFTEREKR 472  thale cress
Q2PMM5  397 SSDQSKDYFDSIRNEDSK--YHTLINQREIQQLKERSILcWDPSFLQTERTEIESERFPKILSGY--SSMCRLFMEREKQ 472  soybean
P61241  400 SSDQSRDHFNSISNEDSE--YHTLIHQTEIEQLKERSIL-WDPSFLQTERTEIESDRFPKCLSGY--FSMSRLFTEREKQ 474  Amborella trichopoda
Q0ZIV6  396 SSDQSRDHFDSISNEDSK--YHTLINQREIQQLKERSIL-WDPSFLQTERTEIESDRFPKCLSGYssMSMSRLFTEREKQ 472  wine grape
8XKU_D  473 MNNHLLPEESEEFLGNPTRAIRSFFSDRWSELHLGSNPTERSTRDQKLLKKEQDVSFVPSRRSENKEIVNIFKIITYLQN 552  thale cress
Q2PMM5  473 MNNHLLPQEIEEFLGNPARATRSFFSDRWSELHLSSNPTERSTRDQKLLKKEQKKHLVLSRRSENKEIVNLFKIIMYLQN 552  soybean
P61241  475 MNNHLFPEEIEEFIGNPTRSIRSFFSDRWSELHLGSNATERSTRDQKLLKKQQDVSFVPSRRSENKEMVDIFKIITYLQN 554  Amborella trichopoda
Q0ZIV6  473 MIIHLLPEEIEEFLGNPTRSIRSFFSDRWSELHLGSNPIERSTRDQKLLKKQQDVSFVPSRRSENKEMVNIFKIITYLQN 552  wine grape
8XKU_D  553 TVSIHPISSDLGCDMVPKDEldMDSSNKISFLNKNPFFDLFHLFHERKRGGYTLRH--ESEERFQEMADLFTLSITEPDL 630  thale cress
Q2PMM5  553 TVSIHPISSYPGCDMVPKGE--LDSSNKISFLNKNPFWGLFHLFHDRNSGRYTLHHdfESEEIFQEMADLFTLSITEPDL 630  soybean
P61241  555 TVSIHPISSDPGCDMVPKDEpdMDSSNKISFLNKNPFCDLFHLFHGRNKGGYTLHHdfESEERFQERADLFTLSITEPDL 634  Amborella trichopoda
Q0ZIV6  553 TVSIHPISSDPGCDMVPKDEpdMDSSNKISFLNKNPFFDLFHLFHDRNRGGYTLHHdfESEERFQEMADRFTLSITEPDL 632  wine grape
8XKU_D  631 VYHKGFAFSIDSYGLDQRQFLKEVFNFRDESKKKSLLVLPPIFYEENESFYRRLRKIWVRISCGNYLEDQ--KRVVFASN 708  thale cress
Q2PMM5  631 VYHKGFAFSIDSSGLGQKHFLNELFNSRDESKNHSLLVLPPLFYEENESFYRRIIKKWVQTSCGNNLEDPkpKIVVFTSN 710  soybean
P61241  635 MYHKGFAFSIDSYGLDQKKLLNEVFNSRDESKKKSLLVLPHIFYEENESFYRRIRTKSVRISCRNGLEDp--KIVVFASN 712  Amborella trichopoda
Q0ZIV6  633 VYHKGFAFSIDSYGLDQKQFLNEVFNSRDESNKKSLLVLPPSFYEENESFYRRIRKKWVRISCGNDLEDPkpKIVVFASN 712  wine grape
8XKU_D  709 NIMEAVNQYRLIRNMIQIqfQYSPYGYIRNVLNRFflmkrpDRNFEYGIQRDLIGNDTLNHRTIMKDTINQHLSNLKKSQ 788  thale cress
Q2PMM5  711 NIMEAVNQYRLIRNLIQI--QYSTHGYIRNVLNRF------NCNFEYGIQRYQIGNDTLNHRTIMKYTINQHLSNLKKSQ 782  soybean
P61241  713 NIMEAVNQYRLIRNLIQI--QYSTYGYIRNVSKRFflmnrsDRNFEYGIQRDQIGNDTLNHITIMKYTINQHLSNLKKSQ 790  Amborella trichopoda
Q0ZIV6  713 NIMEAVNQYILIRNLIQI--QYSTYGYIRNVLNRFflmnrsDRNFEYGIQRDQIGNDTLNHRTIMKYTINQHLSNLKKSQ 790  wine grape
8XKU_D  789 KKWFDPLIFLSQTERSINRDPNAYRYKWSNGSKNFQEHLEHFVSERKSRFQVVFDQLCINQYSIDWSEVIDKKDLSKSLR 868  thale cress
Q2PMM5  783 KKWFDPLIFISRTERSMNRDPNAYRYKWSNGSKNFQEHLDYFISEQNSRFQVVFDRFHINQYSIDWSEVIDKKDLSKSLC 862  soybean
P61241  791 KKWFDPL--ISRTERSMNRDPNAYRYKWSNGSKNFQEHLEHFVSEQKNRFQVVFDRLRINQHSIDWSEVIDKQDLSKSLR 868  Amborella trichopoda
Q0ZIV6  791 KKWFDPLIFISRTERSMNRDPHAYRYKWSNGSKNFQEHLEHFVSEQKSRFQVVFDRLRINQYSIDWSEVIDKKDLSKSLR 870  wine grape
8XKU_D  869 FFLSKllrfflskLLLFLSKLLLFLSNSLP-FFFVSFENIPIHRSEIHIYELKGPNDQLCNQLLESIGLQIVHLKKLKPF 947  thale cress
Q2PMM5  863 FFLSK--------LLLFLPKFLLFLSNSLPsFFFVSFGGIPIHRSEIHIYELKGPNNPLCNQLLESIGLQIFHLKKWKPL 934  soybean
P61241  869 FFLSK--------SLLFLSK-------SLP-FFFVSIGNIPIHRSEIHIYELKGPNDQLCNQLLESIGVQIVHLNKLKPF 932  Amborella trichopoda
Q0ZIV6  871 FFLSK--------SLLFLSKLLLFLSNSLP-FFFVSFGNIPIHRSEIHIYELKGPNDQLCNQLLESIGLQIIHLKKWKLF 941  wine grape
8XKU_D  948 LLDDHNTSQKSKFLINGGTISPFLFNKIPKWMIDSFHTRKNRRKSFDNTDSaYFSIVSHDQDNWLNPVKPFQRSSLISSF 1027 thale cress
Q2PMM5  935 LLDDQDTSQKSKFLINGGTISPFLFNKIPKWMIDSFHTRKNRRKSFDNTDS-YFSMISHDPDNWLNPVKPFHRSSLIYSF 1013 soybean
P61241  933 LLDDHDTSQRSKLLINGGTIARFWFNKIPKWMIDSFHTRNNRGKSFENTDS-YFSMISHDRDNWLNPVKPFHRSSLISSF 1011 Amborella trichopoda
Q0ZIV6  942 LLDDHDTSQKSKFLINGGTISPFLFNKIPKWMIDSFHSRNNRRKSFDNTDS-YFSMISHDQDNWLNPVKPFHRSSLISSF 1020 wine grape
8XKU_D 1028 SKANRLRFLNNPHHFCFYCNKRFPFYVEKARLNNSDftFTYGQFLTILFIHNKTFSSCGGKKKHAFLERDTI--SPssIE 1105 thale cress
Q2PMM5 1014 YKANRLRFLNNQYHFCFYCNKRFPFYVEKACINNYD--FTYGQFLNILFIRNKIFSFCDGQKKHAFLKRDTI--SP--IE 1087 soybean
P61241 1012 YKANQLRFLNNPHHFWFYCNKRFPFYAEKTRINNYD--LTYGQFLNISFIRNKIFSLCVGKKKHVFLERDTIspSP--IE 1087 Amborella trichopoda
Q0ZIV6 1021 YKANRLRFLNNPHRFCFYCNKRFPFYVEKARINNSD--FTYGQFLNILFIRKKIFSLCGGKKKHAFLERDTI--SP--IE 1094 wine grape
8XKU_D 1106 SQVSNIFISNDFPQSGDERYNLYKSFHFPIRSDPLVRRAIYSIADISGTPLIEGQRVNFERTYCQTLSDMNLSDSEEKSL 1185 thale cress
Q2PMM5 1088 SQVSNILIPNDFPQSGDEGYNLYKSFHFPIRYDLFVRGAIYSIADISGTPLTEGQIVHFEKTYCQPLSDMNIPDSEGKNL 1167 soybean
P61241 1088 SQVSDIFIPNDFPQSGDETYNLYKSFHFPTRSDPFVRRAIYSIADISGTPLTEEQRVNFEGTYCQPLSDLNLSDSEGKNL 1167 Amborella trichopoda
Q0ZIV6 1095 SQVSNIFIPNDFPQSGDETYNLYKSFHFPIRSNPFVRRAIYSIADISGTPLTEGQIVNFERTYCQPLSDMNLSDSEGKNL 1174 wine grape
8XKU_D 1186 HQYLNFNSNMGLIHTPCSEKYL---QRKKRSLCLKKCVDKGQMDRTFQRDSAFSTLSKWNLFQTYMPWFFTSTGYKYLNL 1262 thale cress
Q2PMM5 1168 HQYLNFNSNMGLIHTPCSEKYLpseKRKKRSPCLKKCLEKGQMYRTFQQDSVFSTLSKWNLFQTYIPWFLTSTGYKYLNF 1247 soybean
P61241 1168 HQYLSFNSNMGLIHTPCSEKYLpsgKRKKRNLCLNKCVEKRQMYRTFQRDSAFSNISKWNLFQTYMPWFLTSTGCKYINF 1247 Amborella trichopoda
Q0ZIV6 1175 HQYLNFNSNMGLIHTPCSEKYLpseKRKKRSLCIKKCVEKGQMYRTFQRDSAFSTLSKWNLFQTYMPWFLTSTGYKYLNL 1254 wine grape
8XKU_D 1263 IFLDTFSDLLRILSSSQKFVSIFHDIMHGLDISWRILQKKL--CLPQ-------RNLISEISSKSLHNLLLSEEMIHRNN 1333 thale cress
Q2PMM5 1248 IFLDTFSDLLPILSSSQKFVSIFHDIMHGSDILWRIRQIPL--CLPQwnliseiWNLISEIPGNCLHNLLLSEEIIHRNN 1325 soybean
P61241 1248 ILLDTFSDPLPILSSSHKFVSIFHDIMHGS--AWSIPQKKLraILPQ-------WNLISEISSKCLQNLLLSEEMIHRNN 1318 Amborella trichopoda
Q0ZIV6 1255 IFLDTFSDLLPILSSSPKFVSIFHDIMYGSDISWRILQKKL--CLPQ-------RNLISEISSKCLHNLLLSEEMIHRNN 1325 wine grape
8XKU_D 1334 ES--SLISTHLRSPNVREVLYSILFLLLVAGYIVRTHLLFVSRAYSELQTEFEKIKSLMIPSYMIELRKLLDRYPTSELN 1411 thale cress
Q2PMM5 1326 EL--LLISTHLRSLNVQEFFYSILFLLLVAGYLVRTHLLFVSRVYSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELN 1403 soybean
P61241 1319 ESpvPLIWTHLRSPNPREFFYSSLFLLLVAGYLVRTHLLFVSRVSSELHTELEKIKSLMIPSYMMELRKLLDSYPPPELN 1398 Amborella trichopoda
Q0ZIV6 1326 ES--PLISTHLRSPNVREFLYSILFLLLVAGYLVRTHLLFVSRASSELQTEFEKVKSLMIPSYMIELRKLLDRYPTSELN 1403 wine grape
8XKU_D 1412 SFWLKNLFLVALEQLGDCLEEIRG--SGGNMLWGGDPAYGVKSIRSKKKDLKinfidIIDLISIIPNPINRITFSRNTRH 1489 thale cress
Q2PMM5 1404 SFWLKNLFLVALEQLGDSLEEIRSfaFGGNMLWGGGPTYGVKSIRSKKKYLN-----LIDLISIIPNPINRIAFSRNTRH 1478 soybean
P61241 1399 SFWLKNLFLVALEQLGDSPEEIRGsdSGGNMLLGGGPAYGVKSIRSKKKDLNinlidIIDLISIIPNPVNPITFSINTRR 1478 Amborella trichopoda
Q0ZIV6 1404 SFWLKNLFLVALEQLGDSLEEIRGsaSGGNMLLGGGPAYGVKSIRSKKKYLNinlidIIDLISIIPNPINRITFSRNTRC 1483 wine grape
8XKU_D 1490 LSHtS 1494 thale cress
Q2PMM5 1479 LSH-P 1482 soybean
P61241 1479 LSRtS 1483 Amborella trichopoda
Q0ZIV6 1484 LSHtS 1488 wine grape
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