Conserved Protein Domain Family
Epiglycanin_TR

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pfam05647: Epiglycanin_TR (This model is not part of the current CDD release)
Tandem-repeating region of mucin, epiglycanin-like
The unusual mucin, epiglycanin, is membrane-bound at the C-terminus but has a long region of this tandem-repeat at the N-terminus. It was the first mucin identified to be associated with the malignant behaviour of carcinoma cells. Mouse Muc21/epiglycanin is thought to be a highly glycosylated molecule, which makes it likely that its function is dependent on its glycoforms. Cells expressing Muc21 are significantly less adherent to each other and to extracellular matrix components than control cells, and this loss of adhesion is mediated by the TR portion of Muc21. This family also now contains the repeat that was the C. elegans protein of unknown function (DUF801).
Statistics
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PSSM-Id: 516908
Aligned: 6 rows
Threshold Bit Score: 29.6066
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ELK11190      269 FSTGFSTSSNETSTVSnIGSSVSPSETSTTSSTGSSVTPNGTSTPANPGSSTIPSGTSITSSIGFSMT 336 
2_pfamImport    1 VNNESSPTSSEPTTAT-TGSSATSSETSIAANTAPSTTHGSPTTATNAGSQETSSGSSTTSSTGPTMT 67  
O17084         10 EGPSSTVTNSASSETPcNSETQTSDGTSPMTVSSDSTTAGPSSTATNSASSETPCNSETQTSDGTSTM 77   Caenorhabditis elegans
3_pfamImport    1 SDTGSSVTSGGASTTSsTRSSMTSGGASTTSDTGSSVTSGGASTTSDTGSSMTSGGSSTTSSTGSNVT 68  
4_pfamImport    1 SSTGSSMTSGGASTTSdTGSSGTSGGSSTISDTGSSTASSGTSTASKTGSSATTGGSDTSFPTGTQTT 68  
Q5SSG8        391 ttsessttssgastatnSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGSGTAALTGMHTT 458  human
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