Conserved Protein Domain Family
Fil_haemagg
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pfam05594: Fil_haemagg (This model is not part of the current CDD release)
Haemagglutinin repeat
This highly divergent repeat occurs in number of proteins implicated in cell aggregation. The Pfam alignment probably contains three such repeats. These are likely to have a beta-helical structure.
Links
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Statistics
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PSSM-Id: 516881
Aligned: 150 rows
Threshold Bit Score: 32.1273
Created: 14-Feb-2025
Updated: 25-Apr-2025
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q9I120       3221 VSKGAQRIDAAsldnaqgivsg-------------esdvtlsiagkLDNGQGGLVSAQRALSFERDDTLLnNAGGRINGG 3287 Pseudomonas a...
Q9PBE8       2062 LAAASTTINAH------------------------------------TFTNTGTIDARHLIDINAHTMDQ-QGGRLTADA 2104 Xylella fasti...
P12255       1684 VAEGTLRVKAKslt------------------------------teIETGNPGSLIAEVQENIDNKQAIV-VGKDLTLSS 1732 Bordetella pe...
Q9JP78       1722 VAEGTLRVKAKslt------------------------------teIETGNSGSLIAEVQENIDNKQAIV-VGKDLTLSS 1770 Bordetella br...
Q9PEY9        465 LAAGRLTLENDidnrgg-----------------------hitaggAIDAILTTLDNRDGTAALNRLTLQ-GQRLDNQHG 520  Xylella fasti...
O32608       1428 DTTGSVGFNKAnetvtlpetltgekpqgalwdrrrsagngvkssltGAPGAQGSLQAEGKRVDNLAVTQQ-SGIAGQQGV 1506 Edwardsiella ...
Q9JPJ4        882 VSA--GDLAVNhngtfqis--------------------aragnngNPSAQTASVSAKGNIGIVAGEVDI-DAANIAAGK 938  Neisseria men...
Q9JPJ4        527 NASGNLYIHAGkdldlnadkdls-----------tqsislradntaLISSNGNTLTAEKNLDIQAGSLSV-RQSNLQSSG 594  Neisseria men...
7_pfamImport    1 LAANNLSLNAS---------------------------------------HNVTLNNKSKLSAQKADIKA-VNLTLNDTT 40  
8_pfamImport    1 VLAHKLTLNIS---------------------------------------NDVSLNNQSKLSANNLKIKK-VRDLNLNNS 40  

Q9I120       3288 SLLLKGASLDnsdgqlisqgrldailggalvnagaARLASGGDLLLRS 3335 Pseudomonas aeruginosa
Q9PBE8       2105 IHIHTTGDFTtlggqf--------------kargyLKVHAQGNFLASS 2138 Xylella fastidiosa
P12255       1733 AHGNVANEAN-------------------------ALLWAAGELTVKA 1755 Bordetella pertussis Tohama I
Q9JP78       1771 AHGNVANEAN-------------------------ALLWAAGDLTVKA 1793 Bordetella bronchiseptica
Q9PEY9        521 ILTLATEATIht----------------------hTLNNAAGQLHVNG 546  Xylella fastidiosa
O32608       1507 TLRVNGETDLtg----------------------aTIESAAGKVDLSG 1532 Edwardsiella tarda
Q9JPJ4        939 DL---------------------------------ALVATKGNISLNS 953  Neisseria meningitidis
Q9JPJ4        595 GNV--------------------------------QMSATKGNISLNQ 610  Neisseria meningitidis
7_pfamImport   41 ELTAKNLDINs------------------------TTITNNGTI---- 60  
8_pfamImport   41 ELSANN-----------------------------LTLNTSNNITLKN 59
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