Conserved Protein Domain Family
Fil_haemagg

?
pfam05594: Fil_haemagg 
Haemagluttinin repeat
This highly divergent repeat occurs in number of proteins implicated in cell aggregation. The Pfam alignment probably contains three such repeats (personal obs: C Yeats). These are likely to have a beta-helical structure.
Statistics
?
PSSM-Id: 398946
Aligned: 157 rows
Threshold Bit Score: 32.1307
Threshold Setting Gi: 81784967
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q9I120       3221 VSKGAQRIDAAsldnaqgivs-------gesdvtlsiAGKLDNGQGGLVSAQRALSFERDDTLLnNAGGRinggslllkg 3293 Pseudomonas a...
Q8RGZ3         22 VVTNDLKVVTGsnsttstn----------niaidakeLGGMYANRIRIISTDKGAGVNSDAFIV-SKNSK---------- 80   Fusobacterium...
Q7DDD8        265 VVSGKNKLDFDgslaktasapsssdsvtptvaidtatLGGMYADKITLISTDNGAVIRNKGRIF-AATGG---------- 333  Neisseria men...
Q9JY23        250 VSTGPQKVDYAsgeisagtaag----tkptialdtaaLGGMYADSITLIANEKGVGVKNAGTLE-AAKQ----------- 313  Neisseria men...
Q9PEY9        255 ATTGPATVTPDghptaslpatpg---drptvaldvsaLGGMYAGKITLIGTEHGLGVRNAGQLS-ATSAP---------- 320  Xylella fasti...
Q7N9K8        217 AISGENKISATgevidsqqa--------ltgvldsyyLGSMQAGRIRLLNTAKGSGVNLQGTLT-ASDE----------- 276  Photorhabdus ...
P15320        226 AISGLNRVARDgtvqasqqm---------ptaldsyyLGSMQAGRINIINTAQGSGVKLAGSLN-AGDE----------- 284  Serratia marc...
P16466        214 AFTGQNTFSQHfdilssqkp---------vsaldsyfFGSMQSGRIRIINTAEGSGVKLAGKFT-ADND----------- 272  Proteus mirab...
O32608        214 AVSGNNRLTRDlrqidagvn---------gtaldsyyLGSMQAGRIRIINTAAGSGVKLAGTLH-ADQD----------- 272  Edwardsiella ...
WP_143403889   29 VVTGSNKTDKKgnikeksnvn-------gdiaidakeLGGMYANTIKIISTDKGAGVNSDAFIV-SKNSK---------- 90   Fusobacterium...
Q9I120       3294 asldnsdgqlisqgrldailggalvnagaARLASGGDLLLRS 3335 Pseudomonas aeruginosa
Q8RGZ3         81 -----------------------------LEITADGKIKVNK 93   Fusobacterium nucleatum subsp. nucleatum
Q7DDD8        334 -----------------------------VTLSADGKLSNSG 346  Neisseria meningitidis serogroup B
Q9JY23        314 -----------------------------LIVTSSGRIENSG 326  Neisseria meningitidis serogroup B
Q9PEY9        321 -----------------------------LTVTVDGLLENTG 333  Xylella fastidiosa
Q7N9K8        277 -----------------------------IIVDSHGNLNLEA 289  Photorhabdus laumondii subsp. laumondii
P15320        285 -----------------------------LKVKAYD-IRSES 296  Serratia marcescens
P16466        273 -----------------------------LSVKADNIQTDSQ 285  Proteus mirabilis
O32608        273 -----------------------------ISVAAKDRLTLQS 285  Edwardsiella tarda
WP_143403889   91 -----------------------------LEITADGKIKVNK 103  Fusobacterium nucleatum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap