Conserved Protein Domain Family
Auxin_repressed

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pfam05564: Auxin_repressed 
Dormancy/auxin associated protein
This family contains several plant dormancy-associated and auxin-repressed proteins the function of which are poorly understood.
Statistics
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PSSM-Id: 398933
Aligned: 11 rows
Threshold Bit Score: 139.25
Threshold Setting Gi: 300165368
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EFJ31976       7 LWDDVVAGPQPDRGLGMLRnKNAKaVARDlTGLdgdpLGAPGARDPKYQRSSTMvtqsinirPpplirsASFGDESAPAT 86  Selaginella moe...
ERN19723       7 LWDDVLAGPQPDQGLGKLR-KLST-KALS-VKDv---GGEGEGSNSKFGRSLSM--------P------GTPPTPGTPMT 66  Amborella trich...
KHN24763       7 LWDDVVAGPQPERGLGKLR-KLTTlKTID----------EGES--SKLQKTLSM--------P------STPTTPMTPTT 59  Glycine soja
EEC84020       5 LWDDVVAGPRPETGLEKLR-KAATtRPLV-INK----DGDGEASGVAYKRTQSM--------P---------TTPTTPVT 61  long-grained rice
XP_009397192   7 MWDDVVAGPQPERGLGKLR-KVSA-KPLV-IKE-------GESSGNKYQRSLSM--------P---------QTPTTPTT 59  wild Malaysian ...
EEF50833       6 MWDDVVAGPQPDRGLGKLR-KIST-KTLT-IDA------EGET--SKFQRSLSM--------P------AGPGTPSTPVT 60  castor bean
XP_006343229   7 LWDDVMAGPQPDKGLGKLR------KSITlIQThggeGGEGAS--KSYQRSLSM--------PgsgsglSSPGTPGTPVT 70  potato
Q0PY39         7 LWDDVMAGPSPDKGLGKLR------KSLT-IQTgg-eSGEGSS---KYQRSLSM--------P------ASPPTPGTPVT 61  tomato
ALK27168       7 LWDDVVAGPQPDRGLGKLR-KLTT-KPLS-VKT-----DEGES--SKYQRSMSM--------P------ASPGTPATPMT 62  wine grape
B9DGG8         7 LWDDVVAGPQPDRGLGRLR-KITT-QPIN-IRD----IGEGSSSKVVMHRSLTM--------P-------AAVSPGTPTT 64  thale cress
P93017         1 MWDETVAGPKPEHGLGRLRnKITT-QPLD-IKG----VGEGSS-------SKTV--------A------AVAGSPGTPTT 53  thale cress
EFJ31976      87 PTgaassvgspssmagspgTTPK-DNVWRSVFHPGAGraRAVERQGSARYDNVT-PNSPSVYDWMYSPE--SKNK 157 Selaginella moellend...
ERN19723      67 PG-----------------SAKK-DNVWRSVFNPGSN--LATKTIGAEVFDKPQ-PNSPTVYDWLYSGDtrSRHR 120 Amborella trichopoda
KHN24763      60 PTtp--------------gSARKaDNVWRSVFHPGSN--SATKTIGAQMFDKPL-PNTPTVYDWLYSGEtrSRHR 117 Glycine soja
EEC84020      62 PSssspt-------tatttTPRG-SNVWRSVFHPGSN--LATKSLGANLFDRPQ-PNSPTVYDWLYSDEtrSSHR 125 long-grained rice
XP_009397192  60 PTas-------------spTPRQ-GNVWRSVFNPGSN--LATKTLGANLFDKPQ-PNSPTVYDWLYSGEtkSTHR 117 wild Malaysian banana
EEF50833      61 PTtp--------------aSARK-DNVWRSVFHPGSN--LATRGIGAQLFDKPSqPNSPTVYDWLYSGEtrSKHR 118 castor bean
XP_006343229  71 PNty-------------spSARK-DNVWRSVFNPGSN--IATKRIGAEVFDKPShPNAPTVYDWLYSGDtrSKHQ 129 potato
Q0PY39        62 PTni-------------spTVRK-ENVWRSVFHPGSN--LATRRIGAEVFDKPShPNAPTVYDWLYSGNtrSKHH 120 tomato
ALK27168      63 PTtp--------------tSARK-DNVWRSVFHPGSN--LATKGMGSDYFDKPTkKDTPTVYDWLYSGEtrTKHH 120 wine grape
B9DGG8        65 PTtp--------------tTPRK-DNVWRSVFNPGSN--LATRAIGSNIFDKPThPNSPSVYDCVDNEAqrKEHv 122 thale cress
P93017        54 PG-----------------SARK-ENVWRSVFHPGSN--IATRGMGTNLFDKPShPNSPTVYDWLYSDDtrSKHR 108 thale cress
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