Conserved Protein Domain Family
CopD

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pfam05425: CopD 
Copper resistance protein D
Copper sequestering activity displayed by some bacteria is determined by copper-binding protein products of the copper resistance operon (cop). CopD, together with CopC, perform copper uptake into the cytoplasm.
Statistics
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PSSM-Id: 398860
Aligned: 108 rows
Threshold Bit Score: 28.7243
Threshold Setting Gi: 120606081
Created: 11-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P9WM63        117 WLGLAATMVVIqaahDTGVGPARLLasgalsdsVAASEMARGWIVAAICALVVATALRLYTRWlghvvLLVPTVlavvat 196 Mycobacterium ...
CAL63116       52 TWVWISVALIF----GSGLYM-MAL--------IGKPPv---YITLMFVLGVIMALIFAHIFF-----APYRRLkravaa 110 Herminiimonas ...
Q0BSJ3         63 AILRLVIPAIL----LSGFIMSFSLy-------GSFARAPWQ-VHVMTLTGLIMACVYGAILS-----GPWRSLq----- 120 Granulibacter ...
WP_011799680   52 SLAWAAIIVLL----LTGLAM-LLG--------VGMKNAPAG-WHAMLGIGLVMFALFGHLYF-----GPFRRLqqavsa 112 Polaromonas na...
Q12GQ8         65 WLVWPAIGILL----LSGLAM-LLG--------IGMKNAPLG-WHLMLGIGLVMFALFGHLYF-----GPFRRMkqalgn 125 Polaromonas sp...
Q88NT0         55 GWVWLAVAILA----ISGIGMLHMRf-------SGFETAPr-YVHVMIGGGIAMFALFMRIQA-----LLLPELkaavqa 117 Pseudomonas pu...
Q4KH76         55 VWVWIAVVLLP----ISGIGLLHLRf-------SGFETAPk-YVQIMMGLYLVMTALFIRIQS-----LQLPELrkavaa 117 Pseudomonas pr...
Q87XQ5         55 IWVWAAVIVLP----VTGIGMIQLNf-------TGFETAPr-YVQIMMGLYVVMVALFLRIHS-----LQLPELrravda 117 Pseudomonas sy...
Q9I4T0         55 HWVWAAVILLP----ISGVGMLHLSf-------NGFAGAPr-YVQVMMGLYVAMLALFLRVQA-----LQVPELrravqa 117 Pseudomonas ae...
jgi:Pmen_1426  55 VWVWVAVVTLP----LSGFAMLHLSh-------GGLDGAPr-YVQIMIGLYLVMLALFLRIQA-----LRLPELrravas 117 Pseudomonas me...
P9WM63        197 avTGNPGQGPDHDYATSAAIVFAVAFATLTglkIAAAL 234 Mycobacterium tuberculosis H37Rv
CAL63116      111 qdWKAGGAAMG-QIRKLVGINLILGLLTI----VIGSL 143 Herminiimonas arsenicoxydans
Q0BSJ3        121 -nGAIPPVSAFDRIRQLVHVNFGLGFITII---IACTI 154 Granulibacter bethesdensis CGDNIH1
WP_011799680  113 anWPEGGRRVG-QIATLATVNLGLGVLAIA---AIFFM 146 Polaromonas naphthalenivorans
Q12GQ8        126 snWPEGGRRAG-QIATLAITNLALGALAIA---AVIFL 159 Polaromonas sp. JS666
Q88NT0        118 edWPTGAAVLG-RIRRMVGVNLLLGLA------VVAVA 148 Pseudomonas putida KT2440
Q4KH76        118 edWPAGAAALG-KIRRLVGSNLIIGLV------LVALA 148 Pseudomonas protegens Pf-5
Q87XQ5        118 eqWAEGAAALG-HIRRLVGINLIIGLAVVA---LAAAR 151 Pseudomonas syringae pv. tomato
Q9I4T0        118 qdWPAGGQALG-KIRRTVGFNLLLGLLLIA---LVAAR 151 Pseudomonas aeruginosa
jgi:Pmen_1426 118 enWPAGGEVLG-KIRKLVGSNLLIGLSLMA---LVAMR 151 Pseudomonas mendocina ymp
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