2EOC


Conserved Protein Domain Family
WGR

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pfam05406: WGR 
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WGR domain
This domain is found in a variety of polyA polymerases as well as the E. coli molybdate metabolism regulator and other proteins of unknown function. I have called this domain WGR after the most conserved central motif of the domain. The domain is found in isolation in proteins such as Rhizobium radiobacter Ych and is between 70 and 80 residues in length. I propose that this may be a nucleic acid binding domain.
Statistics
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PSSM-Id: 398851
Aligned: 106 rows
Threshold Bit Score: 45.3102
Threshold Setting Gi: 145304741
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2EOC_A          35 CTLNQTNieNNNNKFYIIQLlqdsnRFFTCWNRWGRVGEV--GQSKINHFTRLEDAKKDFEKKFREKTKNNWAER-DHFV 111 human
Q981N7           8 LWIERRDadRNMARFYALSIeetlfGQTCLVRRWGRRNHRphGTALLRYRGRSHRAFPRASARQADARLSAAIRL-PDAQ 86  Mesorhizobium...
Q3JF56          13 AYLEKRNpeKRQFRFYRIMItqtlfGSWAMIREWGRIGSP--GTVREVWFDSEQEALEAGEKLMNQKTRRGYQVIt---- 86  Nitrosococcus...
jgi:Dshi_3754    9 VDLERIDpaRNMARFYRLSVqptlfGEQSVIRSWGRIGTQ--GRSMMVTYASEGDAVKACKKLLCSKVARGYLCL-NDVE 85  Dinoroseobact...
Q877R6           9 LHLRRIDttRNMRRFYLLSIqptlfGGVSLIRDWGRIGTT--GQTMVQTFDASAEAGEAFGRLERAKRRRGYTSA-EERV 85  Bradyrhizobiu...
jgi:Xaut_4993   33 LHLRRIDpaRNMRRFYTLAIqptlfGGATVIRNWGRIGTN--GQSMMETFDQPEQAERAFSRLARTKRRRGYGDAgVNGN 110 Xanthobacter ...
Q98P43           9 AHLHRIDgaRNMARFYSLTIqptlfGGASLVRNWGRIGTK--GQIKIETFDEPQDVDCAFTRLERAKRRRGYVDP-GNTV 85  Mesorhizobium...
Q9R6F6           9 VHLHRIDaaQNMRRYYRIAIqptlfGGASVVRNWGRIGSG--GQTMMETFDHPDDADTALFLIERTKRRRGYRDA-GSSQ 85  Agrobacterium...
Q1QEX3           9 LHLRRIDpaRNMRRFYLLSIqptlfGGVSLIRNWGRIGTN--GQTMMQTFDDSTDAGDALGRLERAKRRRGYGDA-SAER 85  Nitrobacter h...
jgi:BBta_p0010  21 LHLRRIDaaRNMRRFYALSTqptlfGEMSLIRNWGRIGTS--GKIMVQTFDGSAKAVEAFERLERAKRRRGY-AV-ADGN 96  Bradyrhizobiu...
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