Conserved Protein Domain Family
TRAP-delta

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pfam05404: TRAP-delta 
Translocon-associated protein, delta subunit precursor (TRAP-delta)
This family consists of several eukaryotic translocon-associated protein, delta subunit precursors (TRAP-delta or SSR-delta). The exact function of this protein is unknown.
Statistics
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PSSM-Id: 398850
Aligned: 35 rows
Threshold Bit Score: 118.517
Threshold Setting Gi: 167521397
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002405540   9 AALVLIFVNTCSGETCEKPEVTHKLYTTTDGLIVANIAFIAEFDVKCRN-GAKDLALYADVNGKVLPAVRSLdTSGYQVS 87  black-legged tick
CDS36755       3 PAVFFVLLAFSTVFGCDNPTVQTRYYTSTDSLLSSKTVFIVEGRATCENdELS--ELYAVLGDKIVPVSRNLeTDEFQVT 80  Echinococcus mu...
XP_003386631  15 STLFIGIL-----GDCPNPKVESSTYTSGDAFFSTETVYSIELTVTCSNnQAP--SLYAFVNNELILVTKSTsSNSYQVS 87  Amphimedon quee...
XP_001899315   5 FVILVSFVVGTKAVTCESPYHSAATFSTTDAFFHSSTTYIIEFNLQCSN-NVKDMAVYGIVNGKIYQAAVSEeTSKHQVS 83  Brugia malayi
XP_003104203  23 CIVTFITIDLFSGTKCDSPKYSASSFSTTDGFFHYKTTFITEFTLQCSN-NPKNIQYTAVVNGRLIPVSVSDeTAKHQVS 101 Caenorhabditis ...
2_pfamImport   1 IAVAVCLVAAVFCGKCESPKFSASSFSTTDGFFHYKTTFITEFTLQCAN-NAKNIQYSAEVNGRLIPVSVSDeTSKFQVS 79 
Q9U238         4 IAVALCLVASALCAKCESPKYSASSFSTTDGFFHYKTTFITEFTLQCSN-NPKNIQYTAEVNGRLIPVSISDeTAKFQVS 82  Caenorhabditis ...
3_pfamImport   1 --VLVLLVLVGTGLCCENPSVQSSYYTSTNQKLGKDAAFIVELTVNCKN-NVQDLMLYADVDGVQYPVTKSPeGNNYQVS 77 
XP_002130973   5 LVISVLSLLIGSGFCCDQPSVDSSYYTSTNLKLGKNAAFVVELTVKCKN-NVQDLMLYADVNGVQYPVTKSPeGNNYQVS 83  vase tunicate
XP_001745037   4 VLALAALAAFAAADICSNPDVKSEPSITGSPNMYDQTSYGVKFSVSCNGkRVT-EPLTAYVNGQFVPVASSA-TGDYQVS 81  Monosiga brevic...
XP_002405540  88 WTEELSKAASGEYVIRIYDDEGYTALRKVQeRCNRTcNILPPL----SLLTVLMPlGTYHGAWVQSEFVAVLVAVLLWYF 163 black-legged tick
CDS36755      81 FSDDHMKLPKGYYSIRFYDDVGYLHLRKAQ-SQGRPlDSVKPV----FTVDVYHP-GIWLSPLIHSETVALLAASLIGFG 154 Echinococcus mu...
XP_003386631  88 WSLPHNKAVKGTIPVGFYDDEGASTMRKNM-RYGEDvK-VDPL----FTVDVEHK-GIKTQSFIAPGFVAMLLSLLVWWL 160 Amphimedon quee...
XP_001899315  84 WQLEHEESAAQTFDVVIYDEDGLTSYRKAE-RNHDDtSKVKSL----FTVQLKHP-GVSKSSPVASETVVTAFALIALYI 157 Brugia malayi
XP_003104203 102 WTLDHAAAGAQVFNINIFDEEGLAQYKKNP--------STNPL----ITIQQNHT-GLATKSPISSETVAIILAIVGLYQ 168 Caenorhabditis ...
2_pfamImport  80 WTADHANAGAQTFDINVFDEQGAAQFAKNP--------ATKPL----FTIQHHHA-GLARKSPISSETIALLLAIVGLYY 146
Q9U238        83 WTLEHKDAGAQTFNINIFDEEGAAQYAKNP--------VTKPL----FTVQQSHG-GLATKSPISSETVAVIIVVIGLYY 149 Caenorhabditis ...
3_pfamImport  78 WTAKNKKSPAKLYKVKFFDEAGYNALKKAA-RNSQDaESVFPI----FSVDVKHT-GMTSGFWISSELMAFTVAGLIFYF 151
XP_002130973  84 WTAKNKKSPAALFDVKFFDESGYNALKKAA-RINQDaNTVKPL----FSVDVKHH-GMSSGFWVSSELIALAVASLIFYV 157 vase tunicate
XP_001745037  82 WFAKNKDMSSGTTVVTFFDAASFQAAEEAA----------KPVseadFSIAVPYSvPSAFSLPVPAEFIAMFVLGYLVYF 151 Monosiga brevic...
XP_002405540 164 AYSSKMKLQ 172 black-legged tick
CDS36755     155 AVIKKNKff 163 Echinococcus multilocularis
XP_003386631 161 ANTARQKLM 169 Amphimedon queenslandica
XP_001899315 158 GYHFKSQLM 166 Brugia malayi
XP_003104203 169 AIRQKTELV 177 Caenorhabditis remanei
2_pfamImport 147 AIRQKSELV 155
Q9U238       150 AIRQKTELV 158 Caenorhabditis elegans
3_pfamImport 152 VCDERSAV- 159
XP_002130973 158 VCNERSAVi 166 vase tunicate
XP_001745037 152 TAKasaask 160 Monosiga brevicollis MX1
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