Conserved Protein Domain Family
Amidase_5

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pfam05382: Amidase_5 
Bacteriophage peptidoglycan hydrolase
At least one of the members of this family, the Pal protein from the pneumococcal bacteriophage Dp-1 has been shown to be a N-acetylmuramoyl-L-alanine amidase. According to the known modular structure of this and other peptidoglycan hydrolases from the pneumococcal system, the active site should reside at the N-terminal domain whereas the C-terminal domain binds to the choline residues of the cell wall teichoic acids. This family appears to be related to pfam00877.
Statistics
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PSSM-Id: 283125
Aligned: 4 rows
Threshold Bit Score: 234.805
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q8E0W3   4 NIEQAIAWMASRKGKVTYSMDYRNGPSSYDCSSSVYFALRSAGASDNGWAVNTEYEHDWLIKNGYVLIAENtnwNAQRGD 83  Streptococcus agalact...
Q8DXL3   4 NTEIAIAWMSARQGKVSYSMDYRDGPNSYDCSSSVYYALRSAGASSAGWAVNTEYMHDWLIKNGYELIAENvdwNAVRGD 83  Streptococcus agalact...
Q832X5   3 SHDASIQWFEARKGKVVYSMSARLGPNSYDCSSAVYLSLIAGGFLPSGTMGNTETLFGSLESIGWKQTP-----NPKRGD 77  Enterococcus faecalis
Q9CGN7   3 sIENMIAWMQARKGKVTYSMTSRMGPNSYDCSSSIFFAMIAGGFLSAGSMGNTETLFG-MSGTKLKEISRG---EVQRGD 78  Lactococcus lactis su...
Q8E0W3  84 IFIWGKRGASAGAFGHTGMFVDPDNIIHCNYGYNSITVNNHDEIWGYNGQPYVYAY--RYARKQSNA 148 Streptococcus agalactiae serogroup V
Q8DXL3  84 IAIWGMRGHSSGAGGHVVMFIDPENIIHCNWANNGITVNNYNQTAAASGWMYCYVY--RLKSGASTQ 148 Streptococcus agalactiae serogroup V
Q832X5  78 IFIWGVRGASDGAGGHTGMFIDSSSVIHCNYGANGISIDNYQFILKNNGGMPSVIYtdPKNDGGNNP 144 Enterococcus faecalis
Q9CGN7  79 VFISGTPGGSAGSDGHTGIFLSNGSFIHCSYTHNGIAVDTND--AYMSTRLPHHFY--RIVGSGSgn 141 Lactococcus lactis subsp. lactis
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