Conserved Protein Domain Family
Peptidase_A17

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pfam05380: Peptidase_A17 
Pao retrotransposon peptidase
Corresponds to Merops family A17. These proteins are homologous to aspartic proteinases encoded by retroposons and retroviruses.
Statistics
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PSSM-Id: 398835
Aligned: 179 rows
Threshold Bit Score: 129.88
Threshold Setting Gi: 0
Created: 20-May-2020
Updated: 7-Aug-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_008189485   260 TKRELLSKIARNFDPCGWLAPLVVVAKLIMQQLWQ-----E--RLEWDDTIPQ--HLFNAWKIHRTSFKFLNTFKVPRHI 330  pea aphid
XP_011663827   929 TKRIILGQVSRIFDPIGYTAPFVIRAKIGLQKMWE-----A--GYDWDAVLPE--ECQIEWKRFFQEMEELKEVTFERCL 999  purple sea u...
XP_011679949   831 TKRRILSQVARIFDPIGYAAAFVVRAKIGLQRLWE-----E--GLDWDAELSE--SCQSEWRKFFEEMEKLNNVKLERCL 901  purple sea u...
XP_003729153   986 TKRKILSQVARVFDPIGFAAPIIARAKMGLQRLWQ-----M--GLGWDDPLPE--KEQTEWTKLFEEMTLLNNVKLRRCL 1056 purple sea u...
XP_785317      965 TKRKILGKVARIYDPIGFAAPIIIKAKTGLQKLWQ-----S--GYDWDEELPD----GDEWRGLFREMSKLNDISLERCL 1033 purple sea u...
XP_011670896   956 TKRRILSQIAKIFDPIGFASALLVKAKIGMQRLWQ-----L--GLDWDEELPS--REKAEWVKLFREMENLDGVSFQRCL 1026 purple sea u...
XP_003724934   171 SKRKILSQIALVFDPLGFVAAFLIRAKIGMQSLWE-----K--GYDWDEMLPE--ADQKWWIDFFKEMKELDEVKFERSL 241  purple sea u...
45_pfamImport    1 TKRKILARIARIFDPLGFAAAFLVNAKIGMQRLWE-----L--GLGWDAELPP--EEVSRWLALFKEMNNLNHVALDRCL 71  
XP_003730892  1006 TKRSILKQTASYYDVFGILSGILVRPKIFLQKLWQ-----L--NLDWDTPINPqgELCAVLDAINKDLEEATDVEIPRCL 1078 purple sea u...
XP_030289804   281 TRRQLLSQVASLYDPIGLATPVKQKGAILVRKAFQeaggkTltRDTWDKPLSE--RLREEAIHLFEEYTSLNQITFHRSL 358  gilthead sea...
XP_008189485   331 Mn-----SSAHSTFLLHGFGDSSEKAYAAVVYLVS---TQKHSASMLLTAKTRVAPIK-KMTIPRLELCGALLLAELTNA 401  pea aphid
XP_011663827  1000 Tp-----KDVVGKPLLCIFSDASMHAFGACAYLRWe-tEDGDYKTRFVAAKSRVAPLK-PLTVPRLELQAAVLASRLYKT 1072 purple sea u...
XP_011679949   902 Tp-----SNAVGKPTLCIFCDASMKAFGACAYLRWg-tDEGNFEVRFLTAKSRVAPLK-QLTIPRLELQAAVLASRLYRT 974  purple sea u...
XP_003729153  1057 Tp-----QDARGKPVLCIFSDASESAYGTCAYLRWr-tDDNKYEVRFVAAKSKVAPLK-TLTMPRLELQAAVVAARLYKA 1129 purple sea u...
XP_785317     1034 Kp-----QNAQGRPVLCIFCDASEIAYGACAYLRWk-tDDDKYEVRFVSAKSKVAPLK-ALTIPRLELLAGVLAARMHEA 1106 purple sea u...
XP_011670896  1027 Tp-----PGAMRRPTLCVFCDASEEAFGACVYIRWe-lEDGSYDVRFVTAKSRVAPLK-KLTLPRLELQAAVVAVRLDAT 1099 purple sea u...
XP_003724934   242 Tp----sTTVIDHSMPCIFADASQNAFGACVYLRWq-lENGNYDVRFVMAKSRVAPLK-NMTFPRLELQAAVMATRLLTT 315  purple sea u...
45_pfamImport   72 Ta-----PTAEQKPTLCVFSDASENAYGTCAYLRWq-lTNGQFQTKFVTAKSRVAPLK-RLTIPRLELQASVMATRLSAT 144 
XP_003730892  1079 IpekfkgVRPLPEVSLHGASDASEDAMGMGVWLRWshpESTEAELSFVCARARLTPLK-QSSMPRKELQAILLLSRLMCT 1157 purple sea u...
XP_030289804   359 Tp-----VKRIGGPWGITFFDGSDQSYGAVAYFRWe--TKQGILVRLVESKAKLTPLDqKGEPVKAEVCDAVFAVRLKRY 431  gilthead sea...
XP_008189485   402 LLKSTNINIQSVNLWLDS 419  pea aphid
XP_011663827  1073 IVEQLTMEIDDVILFTDS 1090 purple sea urchin
XP_011679949   975 ISTEMTMELEEVIFMTDS 992  purple sea urchin
XP_003729153  1130 ISEEIRLEIEKVVFFVDS 1147 purple sea urchin
XP_785317     1107 ISNEMRLQVEKVVFFTDS 1124 purple sea urchin
XP_011670896  1100 IRDETTLELRETVFMTDS 1117 purple sea urchin
XP_003724934   316 VIKELRLQVEQVVFMADS 333  purple sea urchin
45_pfamImport  145 IKRELKLELEKTIYFVDS 162 
XP_003730892  1158 IKDALRFNIAYCKIWTDS 1175 purple sea urchin
XP_030289804   432 IEKHSRMQVERWLHLLDs 449  gilthead seabream
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