6LO8


Conserved Protein Domain Family
CybS

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pfam05328: CybS (This model is not part of the current CDD release)
CybS, succinate dehydrogenase cytochrome B small subunit
This family consists of several eukaryotic succinate dehydrogenase [ubiquinone] cytochrome B small subunit, mitochondrial precursor (CybS) proteins. SDHD encodes the small subunit (cybS) of cytochrome b in succinate-ubiquinone oxidoreductase (mitochondrial complex II). Mitochondrial complex II is involved in the Krebs cycle and in the aerobic electron transport chain. It contains four proteins. The catalytic core consists of a flavoprotein and an iron-sulfur protein; these proteins are anchored to the mitochondrial inner membrane by the large subunit of cytochrome b (cybL) and cybS, which together comprise the heme-protein cytochrome b. Mutations in the SDHD gene can lead to hereditary paraganglioma, characterised by the development of benign, vascularised tumours in the head and neck.
Statistics
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PSSM-Id: 516758
Aligned: 36 rows
Threshold Bit Score: 120.028
Created: 14-Feb-2025
Updated: 28-Apr-2025
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
6LO8_D        47 KINDIAN-TSKEASSSV---QMF-KPPEFSQFKDSYQKDYERIAKYTLIPLTMVPFYAsftgGVINPLLDASLSSIFLIY 121 Saccharomyces c...
Q1HR55        39 KSLLLPKpAPSLALASLrqfTASpIRRAAATGNHVTLWNAERALSVGLLGILPVGLMF------PSQAGDALMAVSIVMH 112 yellow fever mo...
Q0U9E4        63 RNQILPP-LPQKIEGTTn--DPT-PVPNPDYSHGSYHWSFERIISAGLVPLTLAPFAA----GSLNPVTDSILCALLVVH 134 Parastagonospor...
Q4WRP4        39 KKQILPP-LPQVIQGTMn--DPA-PIPKPHPSEGSYHWTFERLVSVGLIPLTIAPFAA----GSLNPVMDSVLCALLVLH 110 Aspergillus fum...
CAK37397      94 RSCLLCL------LDAVn--DPA-PIPKSHPTEGSYHWTFERIVSAGLVPLCIAPFAA----GSMSPVMDAVICSAIVVH 160
2_pfamImport   1 RRNLLPP-LPQKIQGTVn--DPA-PVPSPSPSHGHYHWTFERILAAGLVPLTVAPFAA----GSFNPVMDAVLCSTLLLH 72 
Q7SGY6        35 RKSLLPP-PPQRIEGTVn--DPV-EVPPPSPSHGSYHWTFDRVVAAGLIPLTVAPFAA----GSLNPTMDAVLAATILIH 106 Neurospora cras...
Q2HDF4        42 RRDLLPP-LPQHVDGTVn--DAA-PVPEPSPSHGSYHWTFDRLVAASLVPLTVAPFAA----GSLNPTLDAFLCATILIH 113 Chaetomium glob...
XP_001542173  72 RRDLLPP-PRQTIQGTMn--DAA-PIPPTSPSHGSYHWTFERSVAVALVPLTIAPFAG----GSVYPVMDAVICGTLLMH 143
Q9P7X0        28 VAKIFPP-PPQTIKGTVn--DAA-VFPHHSKLHGSYHWDFERIIAIAMVPQVMIPLFT----GTSHPLMDAALACTLITH 99  Schizosaccharom...
6LO8_D       122 LQYGFTSCIIDYIPKEKYP-RWHKLALYCLYGGSMLSLYGIYELETKNNGFVDLVKKLWN 180 Saccharomyces cerevisiae S288C
Q1HR55       113 QYWGLEAIVTDYVRPILFGaAVPKIAHGLLLVVSAATLGGLFYFIHNDIGIANTIRKIWS 172 yellow fever mosquito
Q0U9E4       135 SHIGFESCIIDYFPKKRIP-KLRAAAHWALRISTLLLGVALYSFETNDVGITEAVSRVWH 193 Parastagonospora nodorum SN15
Q4WRP4       111 SHIGFHASIIDYFPKRRVP-KTKTFLDWLLRAFTVTTAVGLYEFETNDVGITEAIKRVWK 169 Aspergillus fumigatus
CAK37397     161 SHIGFHASITDYFPTRRVP-KTHTFMIWLLRAFTLSTAVGLYEFETNDVGVTEALRRVWN 219
2_pfamImport  73 SHLGLQNVITDYLPQKRVP-KSRKAAMWLLNLATAVVGVGLYEFETNDVGLTEGVRRIWT 131
Q7SGY6       107 SHTGFGNIIVDYVPSKRVP-KARKVFTWGLNAATVLVGLALYEFETTDVGLTETIKRVWK 165 Neurospora crassa OR74A
Q2HDF4       114 SHTGFQNVIIDYLPKKRVP-RTRKAFMWGLNAATAVVGLALYEFETTDVGITETIKRIWT 172 Chaetomium globosum CBS 148.51
XP_001542173 144 SHIGFQACIIDYIPAWRMP-KARKAFDWLLRIMTLVTAVGLYEFETNDIGMTEAIKRIWK 202
Q9P7X0       100 AHLGFESCVIDYFPARRFK-KLSPLMHWILRGCTVLTLIGVYEFNTNDIGLTEGIKKLWK 158 Schizosaccharomyces pombe 972h-
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